#!/usr/bin/env perl

package Bio::Roary::Main::GeneAlignmentFromNucleotides;
$Bio::Roary::Main::GeneAlignmentFromNucleotides::VERSION = '3.4.0';
# ABSTRACT: Take in multi-FASTA files of nucleotides and align each file with PRANK or MAFFT
# PODNAME: protein_alignment_from_nucleotides


use Cwd qw(abs_path); 
BEGIN { unshift( @INC, abs_path('./lib') ) }
BEGIN { unshift( @INC, abs_path('./t/lib') ) }
use Bio::Roary::CommandLine::GeneAlignmentFromNucleotides;

Bio::Roary::CommandLine::GeneAlignmentFromNucleotides->new(args => \@ARGV, script_name => $0)->run;

__END__

=pod

=encoding UTF-8

=head1 NAME

protein_alignment_from_nucleotides - Take in multi-FASTA files of nucleotides and align each file with PRANK or MAFFT

=head1 VERSION

version 3.4.0

=head1 SYNOPSIS

Take in multi-FASTA files of nucleotides and align each file with PRANK or MAFFT

=head1 AUTHOR

Andrew J. Page <ap13@sanger.ac.uk>

=head1 COPYRIGHT AND LICENSE

This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

This is free software, licensed under:

  The GNU General Public License, Version 3, June 2007

=cut
