Jemboss File Manager
Keywords: java, biology, bioinformatics, EMBOSS, GUI, Jemboss, computational biology, sequence analysis, interface

# Jemboss Results Manager

Applications in Jemboss can be run 'interactively' or in 'batch' mode. A default mode is given, and is based on the length of time it is likely to run for. If it is a short program it is run interactively or if it is usually a medium or long program batch is used.

Interactive applications wait for the process to finish and the results pop up on the screen. Batch process run in the background so that other tasks can be performed in Jemboss while the application is running. In both cases the results are stored on the server machine and can be retieved at any time.

To retrieve the results from applications run previously, go to the 'File' menu and select 'Saved Results'. A list of all the previous runs is then presented in a separate window from which individual runs can be viewed or deleted. On the right hand side of this window the run details are provided with the parameters used.

Batch results are monitored by the 'Job Manager' in the bar at the bottom of the main Jemboss window. This provides the current status of batch processes (i.e. running or completed). Clicking on this bar opens the results manager for the batch processes in that session. On completion batch results can be viewed by double clicking on the program in the list.