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libpappsomspp
Library for mass spectrometry
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This is the complete list of members for pappso::TimsFrameType1, including all inherited members.
| checkScanNum(std::size_t scanNum) const | pappso::TimsFrameBase | |
| copyAndLzfDecompress(const char *src, std::size_t len) | pappso::TimsFrameType1 | private |
| cumulateScan(std::size_t scanNum, std::map< quint32, quint32 > &accumulate_into) const override | pappso::TimsFrameType1 | protectedvirtual |
| cumulateScansInRawMap(std::map< quint32, quint32 > &rawSpectrum, std::size_t scanNumBegin, std::size_t scanNumEnd) const override | pappso::TimsFrame | virtual |
| cumulateScanToTrace(std::size_t scanNumBegin, std::size_t scanNumEnd) const override | pappso::TimsFrame | virtual |
| extractTimsXicListInRtRange(std::vector< XicCoordTims * >::iterator &itXicListbegin, std::vector< XicCoordTims * >::iterator &itXicListend, XicExtractMethod method) const | pappso::TimsFrame | protected |
| getDriftTime(std::size_t scanNum) const | pappso::TimsFrameBase | |
| getId() const | pappso::TimsFrameBase | |
| getMassSpectrumCstSPtr(std::size_t scanNum) const | pappso::TimsFrame | virtual |
| getMassSpectrumSPtr(std::size_t scanNum) const override | pappso::TimsFrameType1 | virtual |
| getMsLevel() const | pappso::TimsFrameBase | |
| getMzCalibrationInterfaceSPtr() const final | pappso::TimsFrameBase | virtual |
| getNbrPeaks(std::size_t scanNum) const override | pappso::TimsFrameType1 | virtual |
| getOneOverK0Transformation(std::size_t scanNum) const | pappso::TimsFrameBase | |
| getRawTraceSPtr(std::size_t scanNum) const override | pappso::TimsFrameType1 | protectedvirtual |
| getScanIndexList(std::size_t scanNum) const override | pappso::TimsFrameType1 | virtual |
| getScanIntensities(std::size_t scanNum) const override | pappso::TimsFrameType1 | virtual |
| getScanNumFromOneOverK0(double one_over_k0) const | pappso::TimsFrameBase | |
| getScanOffset(std::size_t scanNum) const | pappso::TimsFrame | private |
| getTime() const | pappso::TimsFrameBase | |
| getTraceFromCumulatedScans(std::map< quint32, quint32 > &accumulated_scans) const | pappso::TimsFrameBase | |
| getTraceFromCumulatedScansBuiltinCentroid(std::map< quint32, quint32 > &accumulated_scans) const | pappso::TimsFrameBase | |
| getVoltageTransformation(std::size_t scanNum) const | pappso::TimsFrameBase | |
| hasSameCalibrationData(const TimsFrameBase &other) const | pappso::TimsFrameBase | virtual |
| lzfDecompressScan(const char *src, unsigned int src_len, char *dest, unsigned int dest_len) | pappso::TimsFrameType1 | private |
| m_accumulationTime | pappso::TimsFrameBase | protected |
| m_msMsType | pappso::TimsFrameBase | protected |
| m_scanNumber | pappso::TimsFrameBase | protected |
| m_scanOffsetList | pappso::TimsFrameType1 | private |
| m_scanSizeList | pappso::TimsFrameType1 | private |
| m_time | pappso::TimsFrameBase | protected |
| m_timsC6 | pappso::TimsFrameBase | protected |
| m_timsC7 | pappso::TimsFrameBase | protected |
| m_timsDataFrame | pappso::TimsFrame | protected |
| m_timsDvStart | pappso::TimsFrameBase | protected |
| m_timsId | pappso::TimsFrameBase | protected |
| m_timsNdelay | pappso::TimsFrameBase | protected |
| m_timsSlope | pappso::TimsFrameBase | protected |
| m_timsTtrans | pappso::TimsFrameBase | protected |
| m_timsVmax | pappso::TimsFrameBase | protected |
| m_timsVmin | pappso::TimsFrameBase | protected |
| msp_mzCalibration | pappso::TimsFrameBase | protected |
| setAccumulationTime(double accumulation_time_ms) | pappso::TimsFrameBase | |
| setMsMsType(quint8 type) | pappso::TimsFrameBase | |
| setMzCalibration(double T1_frame, double T2_frame, double digitizerTimebase, double digitizerDelay, double C0, double C1, double C2, double C3, double C4, double T1_ref, double T2_ref, double dC1, double dC2) | pappso::TimsFrameBase | |
| setMzCalibrationInterfaceSPtr(MzCalibrationInterfaceSPtr mzCalibration) | pappso::TimsFrameBase | |
| setTime(double time) | pappso::TimsFrameBase | |
| setTimsCalibration(int tims_model_type, double C0, double C1, double C2, double C3, double C4, double C5, double C6, double C7, double C8, double C9) | pappso::TimsFrameBase | |
| TimsDirectXicExtractor | pappso::TimsFrame | private |
| TimsFrame(std::size_t timsId, quint32 scanNum, char *p_bytes, std::size_t len) | pappso::TimsFrame | |
| TimsFrame(const TimsFrame &other) | pappso::TimsFrame | |
| TimsFrame(std::size_t timsId, quint32 scanNum) | pappso::TimsFrame | protected |
| TimsFrameBase(std::size_t timsId, quint32 scanNum) | pappso::TimsFrameBase | |
| TimsFrameBase(const TimsFrameBase &other) | pappso::TimsFrameBase | |
| TimsFrameType1(std::size_t timsId, quint32 scanNum, char *p_bytes, std::size_t len) | pappso::TimsFrameType1 | |
| TimsFrameType1(const TimsFrameType1 &other) | pappso::TimsFrameType1 | |
| unshufflePacket(const char *src) | pappso::TimsFrame | private |
| ~TimsFrame() | pappso::TimsFrame | |
| ~TimsFrameBase() | pappso::TimsFrameBase | |
| ~TimsFrameType1() | pappso::TimsFrameType1 |