pappso::MapTrace Class Reference

#include <maptrace.h>

Inheritance diagram for pappso::MapTrace:

Public Member Functions
	MapTrace ()
	MapTrace (const std::vector< std::pair< pappso_double, pappso_double >> &dataPoints)
	MapTrace (const std::vector< DataPoint > &dataPoints)
	MapTrace (const MapTrace &other)
	MapTrace (const Trace &trace)
virtual	~MapTrace ()
size_t	initialize (const std::vector< pappso_double > &xVector, const std::vector< pappso_double > &yVector)
size_t	initialize (const std::map< pappso_double, pappso_double > &map)
virtual MapTrace &	operator= (const MapTrace &other)
MapTraceSPtr	makeMapTraceSPtr () const
MapTraceCstSPtr	makeMapTraceCstSPtr () const
std::vector< pappso_double >	xValues ()
std::vector< pappso_double >	yValues ()
void	insertOrUpdate (const DataPoint &data_point)
void	insertOrUpdate (const Trace &trace)
Trace	toTrace () const
QString	toString () const

Detailed Description

Definition at line 32 of file maptrace.h.

Constructor & Destructor Documentation

MapTrace() [1/5]

pappso::MapTrace::MapTrace

(

)

Definition at line 30 of file maptrace.cpp.

{
}

MapTrace() [2/5]

pappso::MapTrace::MapTrace

(

const std::vector< std::pair< pappso_double, pappso_double >> &

dataPoints

)

Definition at line 35 of file maptrace.cpp.

{
  for(auto &dataPoint : dataPoints)
    {
      insert(dataPoint);
    }
}

MapTrace() [3/5]

pappso::MapTrace::MapTrace

(

const std::vector< DataPoint > &

dataPoints

)

Definition at line 45 of file maptrace.cpp.

{
  for(auto &dataPoint : dataPoints)
    {
      insert(std::pair<pappso_double, pappso_double>(dataPoint.x, dataPoint.y));
    }
}

MapTrace() [4/5]

pappso::MapTrace::MapTrace

(

const MapTrace &

other

)

Definition at line 54 of file maptrace.cpp.

  : std::map<pappso_double, pappso_double>(other)
{
}

MapTrace() [5/5]

pappso::MapTrace::MapTrace

(

const Trace &

trace

)

Definition at line 60 of file maptrace.cpp.

{
  // qDebug() << __FILE__ << "@" << __LINE__ << __FUNCTION__ << " ()";
 
  for(auto &dataPoint : trace)
    {
      // std::cout << __FILE__ << " @ " << __LINE__ << " " << __FUNCTION__ << "
      // () "
      //<< std::setprecision(15)
      //<< "Current data point: " << dataPoint.toString().toStdString() <<
      // std::endl;
 
      insert(std::pair<pappso_double, pappso_double>(dataPoint.x, dataPoint.y));
    }
 
  // qDebug() << __FILE__ << "@" << __LINE__ << __FUNCTION__ << " ()"
  //<< "After construction, map size: " << size();
}

~MapTrace()

pappso::MapTrace::~MapTrace ( )

virtual

Definition at line 80 of file maptrace.cpp.

{
  // Calls the destructor for each DataPoint object in the vector.
  clear();
}

Member Function Documentation

initialize() [1/2]

size_t pappso::MapTrace::initialize

(

const std::map< pappso_double, pappso_double > &

map

)

Definition at line 114 of file maptrace.cpp.

{
 
  // Clear *this, because initialize supposes that *this will be identical to
  // map.
 
  clear();
 
  for(auto &&pair : map)
    {
      insert(pair);
    }
 
  return size();
}

initialize() [2/2]

size_t pappso::MapTrace::initialize	(	const std::vector< pappso_double > &	xVector,
		const std::vector< pappso_double > &	yVector
	)

Definition at line 88 of file maptrace.cpp.

{
  // Clear *this, because initialize supposes that *this will contain only the
  // data in the vectors.
 
  clear();
 
  // Sanity check
  if(xVector.size() != yVector.size())
    throw ExceptionNotPossible(
      QObject::tr("Fatal error at msrundatasettreenode.cpp "
                  "-- ERROR xVector and yVector must have the same size."
                  "Program aborted."));
 
  for(std::size_t iter = 0; iter < xVector.size(); ++iter)
    {
      insert(std::pair<pappso_double, pappso_double>(xVector.at(iter),
                                                     yVector.at(iter)));
    }
 
  return size();
}

insertOrUpdate() [1/2]

void pappso::MapTrace::insertOrUpdate

(

const DataPoint &

data_point

)

Definition at line 191 of file maptrace.cpp.

{
 
  // Try to insert the data point into the map. Check if that was done or
  // not.
  std::pair<std::map<double, double>::iterator, bool> res =
    insert(std::pair<double, double>(data_point.x, data_point.y));
 
  if(!res.second)
    {
      // One other same (x,y) value pair was seen already. Only increment the y
      // value.
 
      res.first->second += data_point.y;
    }
}

References pappso::res, pappso::DataPoint::x, and pappso::DataPoint::y.

Referenced by insertOrUpdate().

insertOrUpdate() [2/2]

void pappso::MapTrace::insertOrUpdate

(

const Trace &

trace

)

Definition at line 210 of file maptrace.cpp.

{
  for(const DataPoint &data_point : trace)
    insertOrUpdate(data_point);
}

References insertOrUpdate().

makeMapTraceCstSPtr()

MapTraceCstSPtr pappso::MapTrace::makeMapTraceCstSPtr

(

)

const

Definition at line 160 of file maptrace.cpp.

{
  return std::make_shared<const MapTrace>(*this);
}

makeMapTraceSPtr()

MapTraceSPtr pappso::MapTrace::makeMapTraceSPtr

(

)

const

Definition at line 153 of file maptrace.cpp.

{
  return std::make_shared<MapTrace>(*this);
}

operator=()

MapTrace & pappso::MapTrace::operator= ( const MapTrace &  other )

virtual

Definition at line 132 of file maptrace.cpp.

{
 
  if(&other == this)
    return *this;
 
  // Clear *this, because initialize supposes that *this will be identical to
  // other.
 
  clear();
 
  for(auto &pair : other)
    {
      insert(pair);
    }
 
  return *this;
}

toString()

QString pappso::MapTrace::toString

(

)

const

Definition at line 230 of file maptrace.cpp.

{
  // Even if the spectrum is empty, we should return an empty string.
  QString text;
 
  for(auto &&pair : *this)
    {
// For debugging
#if 0
 
      QString new_data_point_text = QString("%1 %2\n")
                                      .arg(pair.first, 0, 'f', 10)
                                      .arg(pair.second, 0, 'f', 10);
 
      qDebug() << "new data point text:" << new_data_point_text;
      text.append(new_data_point_text);
#endif
 
      text.append(QString("%1 %2\n")
                    .arg(pair.first, 0, 'f', 10)
                    .arg(pair.second, 0, 'f', 10));
    }
 
  return text;
}

toTrace()

Trace pappso::MapTrace::toTrace

(

)

const

Definition at line 218 of file maptrace.cpp.

{
  Trace trace;
 
  for(auto &&pair : *this)
    trace.push_back(DataPoint(pair.first, pair.second));
 
  return trace;
}

Referenced by pappso::TraceMinusCombiner::combine(), pappso::TracePlusCombiner::combine(), pappso::TimsData::getTicChromatogram(), pappso::MsRunReaderTicChromatogram::getTicChromatogram(), and pappso::FilterLowIntensitySignalRemoval::reconstructTrace().

xValues()

std::vector< pappso_double > pappso::MapTrace::xValues

(

)

Definition at line 167 of file maptrace.cpp.

{
  std::vector<pappso_double> vector;
 
  for(auto &&pair : *this)
    vector.push_back(pair.first);
 
  return vector;
}

yValues()

std::vector< pappso_double > pappso::MapTrace::yValues

(

)

Definition at line 179 of file maptrace.cpp.

{
  std::vector<pappso_double> vector;
 
  for(auto &&pair : *this)
    vector.push_back(pair.second);
 
  return vector;
}

---

The documentation for this class was generated from the following files:

• pappsomspp/trace/maptrace.h
• pappsomspp/trace/maptrace.cpp