Class NMR_JmolPanel

java.lang.Object
java.awt.Component
java.awt.Container
javax.swing.JComponent
javax.swing.JPanel
org.openscience.jmol.app.jmolpanel.JmolPanel
org.openscience.jmol.app.janocchio.NMR_JmolPanel
All Implemented Interfaces:
ImageObserver, MenuContainer, Serializable, Accessible, JsonNioClient, SplashInterface
public class NMR_JmolPanel extends JmolPanel
See Also:

  • Field Details

  • Constructor Details

  • Method Details

    • getMenuItem

      public JMenuItem getMenuItem(String name)
      Description copied from class: JmolPanel
      Fetch the menu item that was created for the given command.
      Overrides:
      getMenuItem in class JmolPanel
      Parameters:
      name - Name of the action.
      Returns:
      item created for the given command or null if one wasn't created.

    • getWindowName

      protected String getWindowName()
      Overrides:
      getWindowName in class JmolPanel

    • getFrameActions

      protected List<Action> getFrameActions()
      Overrides:
      getFrameActions in class JmolPanel
      Returns:
      A list of Actions that is understood by the upper level application

    • getStringX

      protected String getStringX(String cmd)
      Overrides:
      getStringX in class JmolPanel

    • getIconX

      protected ImageIcon getIconX(String img)
      Overrides:
      getIconX in class JmolPanel

    • createGuiMap

      protected GuiMap createGuiMap()
      Overrides:
      createGuiMap in class JmolPanel

    • createStatusBar

      protected StatusBar createStatusBar()
      Overrides:
      createStatusBar in class JmolPanel

    • createToolBar

      protected JToolBar createToolBar()
      Description copied from class: JmolPanel
      Create the toolbar. By default this reads the resource file for the definition of the toolbars.
      Overrides:
      createToolBar in class JmolPanel
      Returns:
      The toolbar

    • createDisplayAndAddStatusListener

      protected void createDisplayAndAddStatusListener()
      Overrides:
      createDisplayAndAddStatusListener in class JmolPanel

    • setupModelAdapterAndViewer

      protected void setupModelAdapterAndViewer()
      Overrides:
      setupModelAdapterAndViewer in class JmolPanel

    • getDialogs

      protected void getDialogs()
      Overrides:
      getDialogs in class JmolPanel

    • getMeasurementTable

      protected void getMeasurementTable()
      Overrides:
      getMeasurementTable in class JmolPanel

    • setupDisplay

      protected void setupDisplay()
      Overrides:
      setupDisplay in class JmolPanel

    • setFrameLocation

      protected void setFrameLocation(Point loc, JmolPanel parent)
      Overrides:
      setFrameLocation in class JmolPanel

    • setIntoFrame

      protected void setIntoFrame()
      Overrides:
      setIntoFrame in class JmolPanel

    • setupConsole

      protected void setupConsole()
      Overrides:
      setupConsole in class JmolPanel

    • setupDnD

      protected void setupDnD()
      Overrides:
      setupDnD in class JmolPanel

    • setAtomChooser

      protected void setAtomChooser()
      Overrides:
      setAtomChooser in class JmolPanel

    • launchMainFrame

      protected void launchMainFrame()
      Overrides:
      launchMainFrame in class JmolPanel

    • saveWindowSizes

      protected void saveWindowSizes()
      Overrides:
      saveWindowSizes in class JmolPanel

    • getJavaConsole

      public void getJavaConsole()
      Overrides:
      getJavaConsole in class JmolPanel

    • setMenuKeys

      protected String setMenuKeys(String key, String tokens)
      Description copied from class: JmolPanel
      opportunity to adjust menus for a custom application
      Overrides:
      setMenuKeys in class JmolPanel
      Parameters:
      key -
      tokens -
      Returns:
      possibly changed token string

    • doClose

      protected boolean doClose(boolean saveSize)
      Overrides:
      doClose in class JmolPanel

    • getMinindex

      public int getMinindex()

    • getCurrentStructureFile

      public String getCurrentStructureFile()

    • getUserDirectory

      public static File getUserDirectory()
      Returns a new File referenced by the property 'user.dir', or null if the property is not defined.
      Returns:
      a File to the user directory

    • dumpContainer

      protected static void dumpContainer(Container c, String s)

    • tokenize

      protected static String[] tokenize(String input)
      Take the given string and chop it up into a series of strings on whitespace boundries. This is useful for trying to get an array of strings out of the resource file.
      Parameters:
      input - String to chop
      Returns:
      Strings chopped on whitespace boundries

    • writeNmrData

      public void writeNmrData(File file) throws IOException
      Throws:
      IOException

    • readNmrData

      public void readNmrData(File file) throws Exception
      Throws:
      Exception

    • readNmrDataJSON

      public void readNmrDataJSON(File file) throws Exception
      Throws:
      Exception

    • getFrameAtomCount

      public int getFrameAtomCount()