java.lang.Object

org.jmol.util.MeshSurface

org.jmol.jvxl.data.MeshData

public class MeshData extends MeshSurface

Nested Class Summary

Nested Classes

Modifier and Type

Class

Description

protected class

MeshData.SortSet
Field Summary

Fields

Modifier and Type

Field

Description

static final int

MODE_GET_COLOR_INDEXES

static final int

MODE_GET_VERTICES

static final int

MODE_PUT_SETS

static final int

MODE_PUT_VERTICES

String

polygonColorData

int

vertexIncrement

Fields inherited from class MeshSurface
altVertices, bsDisplay, bsPolygons, bsSlabDisplay, bsSlabGhost, colix, colixBack, colorsExplicit, dataOnly, haveQuads, iA, iB, iC, isColorSolid, isDrawPolygon, isMerged, mat4, mergePolygonCount0, mergeVertexCount0, meshType, normalCount, normals, normalsTemp, normixCount, nSets, oabc, offset, P_CHECK, P_CONTOUR, P_EXPLICIT_COLOR, pc, pcs, pis, polygonCount0, SEED_COUNT, slabColix, slabMeshType, slabOptions, surfaceAtoms, surfaceSet, vc, vcs, vertexCount0, vertexSets, vertexSource, vs, vvs, vwr
Constructor Summary

Constructors

Constructor

Description

MeshData()
Method Summary

Modifier and Type

Method

Description

int

addVertexCopy(T3 vertex, float value, int assocVertex, boolean asCopy)

static Object

calculateVolumeOrArea(MeshData m, BS thisSet, boolean isArea, boolean getSets)

static boolean

checkCutoff(int iA, int iB, int iC, float[] vertexValues)

BS[]

getSurfaceSet()

void

invalidateSurfaceSet(int i)

void

invalidateVertices(BS bsInvalid)

void

setVertexSets(boolean onlyIfNull)

void

updateInvalidatedVertices(BS bs)

Methods inherited from class MeshSurface
addPolygon, addPolygonC, addQuad, addTriangle, addTriangleCheck, addV, addVCVal, getFaces, getMeshSlicer, getResolution, getSlabColor, getSlabType, getSphereData, getSphericalInterpolationFraction, getVertices, invalidatePolygons, newMesh, resetSlab, setABC, setBoundingBox, setBox, setColix, setColixBack, setPolygonCount, setTranslucentVertices, slabBrillouin, slabPolygonsList

Methods inherited from class Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details
- MODE_GET_VERTICES
  public static final int MODE_GET_VERTICES
  
  See Also:
  
  Constant Field Values
- MODE_GET_COLOR_INDEXES
  public static final int MODE_GET_COLOR_INDEXES
  
  See Also:
  
  Constant Field Values
- MODE_PUT_SETS
  public static final int MODE_PUT_SETS
  
  See Also:
  
  Constant Field Values
- MODE_PUT_VERTICES
  public static final int MODE_PUT_VERTICES
  
  See Also:
  
  Constant Field Values
- vertexIncrement
  
  public int vertexIncrement
- polygonColorData
  
  public String polygonColorData
Constructor Details
- MeshData
  
  public MeshData()
Method Details
- addVertexCopy
  
  public int addVertexCopy(T3 vertex, float value, int assocVertex, boolean asCopy)
- getSurfaceSet
  
  public BS[] getSurfaceSet()
- setVertexSets
  
  public void setVertexSets(boolean onlyIfNull)
- invalidateSurfaceSet
  
  public void invalidateSurfaceSet(int i)
- checkCutoff
  
  public static boolean checkCutoff(int iA, int iB, int iC, float[] vertexValues)
- calculateVolumeOrArea
  
  public static Object calculateVolumeOrArea(MeshData m, BS thisSet, boolean isArea, boolean getSets)
  
  Parameters:
  
  m -
  
  thisSet - set to Integer.MIN_VALUE to ensure an array. If a set has been selected, we return a Float
  
  isArea -
  
  getSets -
  
  Returns:
  
  Float or double[]
- updateInvalidatedVertices
  
  public void updateInvalidatedVertices(BS bs)
- invalidateVertices
  
  public void invalidateVertices(BS bsInvalid)

Class MeshData

Nested Class Summary

Field Summary

Fields inherited from class MeshSurface

Constructor Summary

Method Summary

Methods inherited from class MeshSurface

Methods inherited from class Object

Field Details

MODE_GET_VERTICES

MODE_GET_COLOR_INDEXES

MODE_PUT_SETS

MODE_PUT_VERTICES

vertexIncrement

polygonColorData

Constructor Details

MeshData

Method Details

addVertexCopy

getSurfaceSet

setVertexSets

invalidateSurfaceSet

checkCutoff

calculateVolumeOrArea

updateInvalidatedVertices

invalidateVertices