8

dir
458
https://picard.svn.sourceforge.net/svnroot/picard/trunk/src/java/net/sf/picard/sam
https://picard.svn.sourceforge.net/svnroot/picard



2010-06-17T19:41:57.382530Z
451
brilliantred


svn:special svn:externals svn:needs-lock











e7d7ca66-9cb8-402e-a9b0-1104c3ddb36d

AbstractAlignmentMerger.java
file




2010-06-22T13:42:46.000000Z
78b353c51dd344e6c9036fb1d80df450
2010-06-17T19:41:57.382530Z
451
brilliantred

AbstractDuplicateFindingAlgorithm.java
file




2010-06-22T13:42:46.000000Z
ab341e2e990b937f603d872ee8d4de1f
2010-05-12T21:10:53.680472Z
403
tfenne

ReservedTagConstants.java
file




2010-06-22T13:42:46.000000Z
8b2a0141472e04db9eaf05203d122baf
2009-11-12T12:56:17.422032Z
166
tfenne

MarkDuplicates.java
file




2010-06-22T13:42:46.000000Z
4a1b4d3aa340aabfe2da55e06113e048
2010-06-10T13:37:22.940634Z
436
alecw

EstimateLibraryComplexity.java
file




2010-06-22T13:42:46.000000Z
b39fd1587a2eca0bcd13de0ec23429a9
2010-05-12T21:10:53.680472Z
403
tfenne

ComparableSamRecordIterator.java
file




2010-06-22T13:42:46.000000Z
581f8b8ca1133294103c3bce62807052
2010-06-08T18:40:28.762279Z
434
alecw

SamFormatConverter.java
file




2010-06-22T13:42:46.000000Z
a92bd0f4ff89ac75c6ab82e4644c8479
2009-06-10T21:07:03.046378Z
43
alecw

SamToFastq.java
file




2010-06-22T13:42:46.000000Z
5290eafb12a0442ecee9543efe6c28a8
2010-02-23T14:28:20.512719Z
319
brilliantred
has-props

CreateSequenceDictionary.java
file




2010-06-22T13:42:46.000000Z
88123ede69fda370b603c9f97ca3fffb
2009-12-18T22:16:26.344062Z
201
tfenne

FastqToSam.java
file




2010-06-22T13:42:46.000000Z
b1982fc827d5e7ea0d0b22d61ad6a7f3
2010-03-01T23:11:22.792819Z
328
alecw

ReadEndsMap.java
file




2010-06-22T13:42:46.000000Z
4f50243bceacfdeac8c1549791e52ad3
2009-05-14T17:29:45.170024Z
6
alecw

RAMReadEndsMap.java
file




2010-06-22T13:42:46.000000Z
d51f7555448ecf608b8dd85531914fa0
2009-08-11T14:55:18.267530Z
89
alecw

MergeSamFiles.java
file




2010-06-22T13:42:46.000000Z
6d3975aab886b7e58a85e6cf5b265140
2010-05-11T13:56:19.802769Z
396
tfenne

ReplaceSamHeader.java
file




2010-06-22T13:42:46.000000Z
06046f7c95a76d460c073d9368695163
2010-01-07T21:45:04.087400Z
254
alecw

ReadEnds.java
file




2010-06-22T13:42:46.000000Z
e879273e33f97f2db0288b16be887308
2010-05-12T21:10:53.680472Z
403
tfenne

ValidateSamFile.java
file




2010-06-22T13:42:46.000000Z
599c8d991c1e23ce6da315a49a8dc685
2010-03-15T21:08:00.591220Z
355
brilliantred

DuplicationMetrics.java
file




2010-06-22T13:42:46.000000Z
8f51823d85a94a4207726de534a38deb
2010-02-10T19:11:58.731707Z
281
tfenne

MergingSamRecordIterator.java
file




2010-06-22T13:42:46.000000Z
041e7aa6f85714cf38d1584d739b3190
2010-06-08T18:40:28.762279Z
434
alecw

FixMateInformation.java
file




2010-06-22T13:42:46.000000Z
bce37743942b85dfc32f6bebea1ee7a2
2010-06-17T19:41:57.382530Z
451
brilliantred

RevertSam.java
file




2010-06-22T13:42:46.000000Z
f5f65ec235045cf10bd6f264ac2d47df
2010-06-17T19:41:57.382530Z
451
brilliantred

CompareSAMs.java
file




2010-06-22T13:42:46.000000Z
576f789666dd864be36f26a3733532ff
2010-05-12T12:55:18.003610Z
400
alecw

ViewSam.java
file




2010-06-22T13:42:46.000000Z
26a1259276b47544607425d574ac9719
2009-10-22T13:26:37.335411Z
147
alecw

MergeBamAlignment.java
file




2010-06-22T13:42:46.000000Z
8348cc4a32e05988a7a53628a960adb4
2010-06-17T19:41:57.382530Z
451
brilliantred

SamAlignmentMerger.java
file




2010-06-22T13:42:46.000000Z
5f32d38aaa71d63e9db1bd3ec7da0fbb
2010-06-17T19:41:57.382530Z
451
brilliantred

ReadEndsCodec.java
file




2010-06-22T13:42:46.000000Z
91970fdcae3134f63f39f78cff40e527
2010-02-10T19:11:58.731707Z
281
tfenne

CleanSam.java
file




2010-06-22T13:42:46.000000Z
2950c5a3ef8a45e176b841613548df2b
2010-02-19T19:33:37.422686Z
317
brilliantred

CigarClippingIterator.java
file




2010-06-22T13:42:46.000000Z
602867db8dc34ec81a00df1c08943c1f
2010-02-19T19:33:37.422686Z
317
brilliantred

SamFileValidator.java
file




2010-06-22T13:42:46.000000Z
be46352b094e23d96084c6687f1149ed
2010-05-26T15:55:14.424023Z
422
tfenne

SortSam.java
file




2010-06-22T13:42:46.000000Z
dee519146c05e6bf003a02cf493096de
2010-01-19T21:08:49.696089Z
259
weisburd

SamPairUtil.java
file




2010-06-22T13:42:46.000000Z
3fc65f622aa26ba195ff9818f8389e09
2010-06-17T19:41:57.382530Z
451
brilliantred

SamFileHeaderMerger.java
file




2010-06-22T13:42:46.000000Z
6aec96039a95ae1ed892c1d32227012b
2010-06-16T17:35:17.355994Z
447
weisburd

DiskReadEndsMap.java
file




2010-06-22T13:42:46.000000Z
ab79eed2cdc6e0b9d1032bbb309b27e7
2009-06-24T12:24:40.038999Z
58
alecw

