##FastQC	0.10.0
>>Basic Statistics	pass
#Measure	Value	
Filename	reads.fastq	
File type	Conventional base calls	
Encoding	Sanger / Illumina 1.9	
Total Sequences	41809	
Filtered Sequences	0	
Sequence length	50-76	
%GC	58	
>>END_MODULE
>>Per base sequence quality	pass
#Base	Mean	Median	Lower Quartile	Upper Quartile	10th Percentile	90th Percentile
1	33.80762515247913	33.0	32.0	39.0	29.0	39.0
2	33.134109880647706	33.0	31.0	39.0	26.0	39.0
3	33.06271376976249	33.0	31.0	39.0	26.0	39.0
4	32.98277882752517	33.0	31.0	39.0	26.0	39.0
5	32.595996077399604	33.0	30.0	39.0	24.0	39.0
6	32.81685761438925	33.0	30.0	39.0	25.0	39.0
7	32.73541581956038	33.0	30.0	39.0	25.0	39.0
8	32.580473103877154	33.0	30.0	39.0	24.0	39.0
9	32.73194766677031	33.0	30.0	39.0	25.0	39.0
10-14	32.70046640675453	33.0	30.4	39.0	24.6	39.0
15-19	32.26047501734077	33.0	29.4	39.0	23.4	39.0
20-24	31.802741036618908	32.4	28.4	39.0	22.2	39.0
25-29	31.11832858953814	32.0	27.0	38.4	20.6	39.0
30-34	30.644952043818318	31.6	26.0	38.0	19.6	39.0
35-39	30.105517950680472	31.0	25.6	37.2	19.2	39.0
40-44	27.6560644837236	28.8	21.8	34.6	16.4	37.8
45-49	28.6562032098352	29.6	22.2	36.6	17.6	39.0
50-54	28.11854109960272	28.6	21.0	36.8	16.8	39.0
55-59	28.24024030925279	29.0	21.0	37.0	17.0	39.0
60-64	28.332888717148773	29.2	21.0	37.0	16.6	39.0
65-69	28.27039680306141	29.8	21.0	36.8	16.0	39.0
70-74	28.946874819863865	30.8	21.8	37.0	17.2	38.8
75-76	30.895141325417804	32.5	25.0	37.0	21.0	38.5
>>END_MODULE
>>Per sequence quality scores	pass
#Quality	Count
17	1.0
18	29.0
19	131.0
20	412.0
21	889.0
22	1630.0
23	2408.0
24	3266.0
25	3768.0
26	3732.0
27	3211.0
28	2491.0
29	1802.0
30	1253.0
31	1053.0
32	1162.0
33	1407.0
34	1709.0
35	2054.0
36	2700.0
37	3814.0
38	2884.0
39	3.0
>>END_MODULE
>>Per base sequence content	warn
#Base	G	A	T	C
1	28.225980052141885	25.36056829869167	22.162692243296895	24.250759405869548
2	33.93288526393838	26.054198856705497	18.082231098567295	21.930684780788827
3	31.942883111291824	23.762826185749482	18.687363964696598	25.606926738262096
4	30.043770480040184	24.33925709775407	18.850008371403288	26.76696405080246
5	29.438637613910878	23.927862421966562	18.350116003731255	28.2833839603913
6	29.194671003850846	23.35143150996197	19.18008084383745	28.27381664234973
7	28.77610083953216	23.64084288071946	19.321198784950607	28.26185749479777
8	29.450596761462844	23.679112152885743	18.792604463153868	28.07768662249755
9	30.345140998349642	22.91372670956014	18.84044105336172	27.900691238728502
10-14	29.720395130235115	23.27537133153149	18.687842330598674	28.316391207634723
15-19	29.769666818149204	23.12851299959339	18.389342007701693	28.712478174555716
20-24	30.154273003420318	22.676457222129205	18.55246478031046	28.616804994140015
25-29	29.729484082374608	22.852974239996175	18.30323614532756	29.11430553230166
30-34	29.705087421368603	22.917075270874694	18.638092276782512	28.73974503097419
35-39	29.772537013561674	22.619531679781865	18.69310435552154	28.914826951134927
40-44	29.226721519290106	22.51285608361836	18.528546485206533	29.731875911885002
45-49	29.62041665670071	22.352125140519984	18.772513095266568	29.254945107512736
50-54	29.548587266376497	22.36017173149415	18.40530806436473	29.685932937764626
55-59	29.72889459903397	22.163313763437362	18.454791371898498	29.65300026563017
60-64	29.460286113385674	22.29300130051539	18.71477770820288	29.531934877896056
65-69	29.11485585818594	22.71253208125261	18.49737049784799	29.67524156271346
70-74	29.2163440470254	22.36728772836484	18.961270532057966	29.45509769255179
75-76	30.46224256292906	21.501144164759726	18.299771167048053	29.736842105263158
>>END_MODULE
>>Per base GC content	warn
#Base	%GC
1	52.47673945801144
2	55.863570044727204
3	57.549809849553924
4	56.810734530842645
5	57.72202157430218
6	57.468487646200586
7	57.03795833432993
8	57.528283383960385
9	58.24583223707814
10-14	58.03678633786984
15-19	58.48214499270492
20-24	58.77107799756034
25-29	58.84378961467627
30-34	58.4448324523428
35-39	58.687363964696594
40-44	58.95859743117511
45-49	58.87536176421345
50-54	59.23452020414112
55-59	59.38189486466414
60-64	58.99222099128173
65-69	58.7900974208994
70-74	58.67144173957719
75-76	60.199084668192214
>>END_MODULE
>>Per sequence GC content	warn
#GC Content	Count
0	0.0
1	0.0
2	0.0
3	0.0
4	0.0
5	0.0
6	0.0
7	0.0
8	0.0
9	0.0
10	0.0
11	0.0
12	0.0
13	0.5
14	1.5
15	1.0
16	2.5
17	6.0
18	6.5
19	13.0
20	25.0
21	30.0
22	34.5
23	33.5
24	35.5
25	44.0
26	37.5
27	33.0
28	42.0
29	55.0
30	78.5
31	107.5
32	130.5
33	147.5
34	149.0
35	155.0
36	188.5
37	222.0
38	260.5
39	324.5
40	407.0
41	498.0
42	549.0
43	548.0
44	538.5
45	614.5
46	704.5
47	771.5
48	879.5
49	1055.0
50	1221.0
51	1333.0
52	1491.0
53	1654.0
54	1814.0
55	2087.5
56	2524.5
57	2924.5
58	3074.0
59	3005.5
60	2929.5
61	2919.0
62	2910.0
63	2765.0
64	2595.5
65	2503.0
66	2326.0
67	2164.5
68	2002.0
69	1712.0
70	1419.0
71	1246.5
72	1010.0
73	708.0
74	504.5
75	393.0
76	313.0
77	202.5
78	120.0
79	90.0
80	70.0
81	41.0
82	22.0
83	15.0
84	10.5
85	5.5
86	3.0
87	2.0
88	1.5
89	0.5
90	0.0
91	0.0
92	0.0
93	0.0
94	0.0
95	0.0
96	0.0
97	0.0
98	0.0
99	0.0
100	0.0
>>END_MODULE
>>Per base N content	pass
#Base	N-Count
1	0.0
2	0.0
3	0.0
4	0.0
5	0.0
6	0.0
7	0.0
8	0.0
9	0.0
10-14	0.0
15-19	0.0
20-24	0.0
25-29	0.0
30-34	0.0
35-39	0.0
40-44	0.0
45-49	0.0
50-54	0.0
55-59	0.0
60-64	0.0
65-69	0.0
70-74	0.0
75-76	0.0
>>END_MODULE
>>Sequence Length Distribution	warn
#Length	Count
50	704.0
51	612.0
52	645.0
53	694.0
54	759.0
55	770.0
56	737.0
57	714.0
58	789.0
59	840.0
60	786.0
61	573.0
62	592.0
63	590.0
64	627.0
65	627.0
66	585.0
67	618.0
68	597.0
69	746.0
70	871.0
71	766.0
72	900.0
73	1084.0
74	1580.0
75	2306.0
76	20697.0
>>END_MODULE
>>Sequence Duplication Levels	pass
#Total Duplicate Percentage	7.85715994163936
#Duplication Level	Relative count
1	100.0
2	3.5536289066555913
3	0.37638874467864186
4	0.05451147336725158
5	0.007787353338178798
6	0.0025957844460595993
7	0.0025957844460595993
8	0.0
9	0.0
10++	0.0
>>END_MODULE
>>Overrepresented sequences	pass
>>END_MODULE
>>Kmer Content	fail
#Sequence	Count	Obs/Exp Overall	Obs/Exp Max	Max Obs/Exp Position
TTTTT	4825	8.304782	17.475904	69
AGAAG	11330	3.8848162	5.8938537	19
AAGAA	7795	3.4860027	5.6175976	15
AGGAG	12320	3.238771	4.9533596	34
TCCTG	7290	3.1142645	5.5074177	7
GAGGA	11835	3.1112707	5.0357003	63
ATTTT	2175	3.0150914	6.4625645	72
TTTGT	2805	2.9812822	7.445189	55
TGAAG	6575	2.7991488	5.347728	1
TCTTC	4045	2.798383	6.631963	11
GAAGA	8035	2.7550309	5.2137938	17
AGCTG	8120	2.7211647	5.8205366	70
AAGGA	7630	2.616165	5.2137938	1
TTTTA	1825	2.5299044	5.9263377	69
GTTTT	2330	2.4764307	5.270077	1
AAAAA	4245	2.4760551	5.5247293	65
TTTTG	2295	2.439231	5.270077	34
TTTTC	2200	2.40067	5.540622	59
TGTTT	2225	2.364832	5.222295	57
TGGAC	6940	2.3257244	5.982022	1
CTTTT	1995	2.1769712	5.81387	72
TTTAT	1390	1.9268858	5.95717	45
CTCTT	2735	1.8921082	5.031144	10
TTATT	1170	1.6219113	6.4154143	42
>>END_MODULE
