<?xml version="1.0"?>
<!DOCTYPE HMM PUBLIC "-//ghmm.org//DOCUMENT ghmm V1.0//EN" "http://ghmm.sourceforge.net/xml/1.0/ghmm.dtd">
<HMM version="1.0" name="example" type="discrete transition-classes"> 
  <alphabet id="0">
    <symbol code="0">A</symbol>
    <symbol code="1">C</symbol>
    <symbol code="2">G</symbol>
    <symbol code="3">T</symbol>
  </alphabet>
  <state id="0" initial="1.0" desc="State 0">
    <discrete id="0">0.25,0.25,0.25,0.25</discrete>
    <!-- optional -->
    <position x="100" y="200"/>
  </state>
  <state id="1" initial="0.0" desc="State 1">
    <!-- fixed is optional -->
    <discrete id="0" fixed="1">0.2,0.2,0.3,0.3</discrete>
    <!-- optional -->
    <position x="300" y="300"/>
  </state>
  <transition source="0" target="0">
    <probability>0.2, 0.9</probability>
  </transition>
  <transition source="0" target="1">
    <probability>0.8, 0.1</probability>
  </transition>
  <transition source="1" target="0">
    <probability>0.6, 0.3</probability>
  </transition>
  <transition source="1" target="1">
    <probability>0.4, 0.7</probability>
  </transition>
  <switchingFunction type="external"/>
</HMM>
