from libcpp cimport bool
from Types cimport *
from MSSpectrum cimport *

cdef extern from "<OpenMS/ANALYSIS/RNPXL/RNPxlDeisotoper.h>" namespace "OpenMS":
    cdef cppclass Deisotoper:
        Deisotoper() nogil except +
        Deisotoper(Deisotoper) nogil except + # wrap-ignore

# COMMENT: wrap static methods
cdef extern from "<OpenMS/ANALYSIS/RNPXL/RNPxlDeisotoper.h>" namespace "OpenMS::Deisotoper":
        void deisotopeAndSingleCharge(MSSpectrum & spectra, 
                double fragment_tolerance, 
                bool fragment_unit_ppm, 
                int min_charge, 
                int max_charge, 
                bool keep_only_deisotoped, 
                unsigned int min_isopeaks,  
                unsigned int max_isopeaks, 
                bool make_single_charged, 
                bool annotate_charge) nogil except + # wrap-attach:Deisotoper

