>ALU Human ALU interspersed repetitive sequence - a  consensus
GGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTGGCGCGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAA
>MIR mammalian-wide interspersed repeat (MIR) - a consensus
ACAGYAYAGCATAGTGGTTAAGAGCACGGRCTCTGGAGCCAGACTGCCTGGGTTCGAATCCCGGCTCTGCCACTTACTAGCTGTGTGACCTTGGGCAAGTTACTTAACCTCTCTGTGCCTCAGTTTCCTCATCTGTAAAATGGGGATAATAATAGTACCTACCTCATAGGGTTGTTGTGAGGATTAAATGAGTTAATAYATGTAAAGCGCTTAGAACAGTGCCTGGCACATAGTAAGCGCTCAATAAATGTTRGYTATTATT
>MIR2 Repetitive element - a consensus
TTNTTTATTGTCTGTCTCCTCCACTAGANTGTAAGCTCCATGAGGGCAGGGATTTTGTCTGTYTTGTTCACTGCTGTATCCCCAGCGCCTAGAACAGTGCCTGGCACATAGTAGGCGCTCAATAAATATTTGTTGAATGAATGAATGAAT
>L1 Human L1 interspersed repetitive sequence - full length copy
[encoded data, 6140 characters]
>L1PA2 3'-end of L1 repeat (subfamily L1PA2) - a consensus sequence
CTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAATCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTGGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAAAGTATAATAAAA
>L1PA7 3'-end of L1 repeat (subfamily L1PA7) - a consensus sequence
CTAATATCCAGAATCTACAAGGAACTTAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCAAAGGATATGAACAGACACTTCTCAAAAGAAGACATTTATGYAGCCAACAAACAYATGAAAAAAAGCTCATCATCACTGGTCATTAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCAYGCCAGTTAGAATGGCGATCATTAAAAAGTCAGGAAACAACAGATGCTGGAGAGGATGTGGAGAAATAGGAATGCTTTTACACTGTTGGTGGGAGTGTAAATTAGTTCAACCATTGTGGAAGACAGTGTGGCGATTCCTCAAGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATATACCCAAAGGATTATAAATCATTCTRCTATAAAGACACATGCACACGTATGTTTATTGCAGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGCCCATCAATGATAGACTGGATAAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAAGGATGAGTTCATGTCCTTTGCAGGGACATGGATGAAGCTGGAAACCATCATTCTCAGCAAACTAACACAGGAACAGAAAACCAAACACCGCATGTTCTCACTCATAAGTGGGAGTTGAACAATGAGAACACATGGACACAGGGAGGGGAACATCACACACCGGGGCCTGTCGGGGGGTGGGGGGCTAGGGGAGGGATAGCATTAGGAGAAATACCTAATGTAGATGACGGGTTGATGGGTGCAGCAAACCACCATGGCACATGTATACCTATGTAACAAACCTGCACGTTCTGCACATGTATCCCAGAACTTAAAGTATAATAATA
>L1PA11 3'-end of L1 repeat (subfamily L1PA11) - a consensus sequence
CTAATATCCAGAATSTACAARGAACTTAAACAAATTTACAAGAAAAAAACAAAMAACCCCATCAAAAAGTGGGCAAAGGACATGAACAGACACTTCTCAAAAGAAGACATWTATGTGGCCAATAAGCACATGAAAAAAAGCTCAACATCACTGATCATTAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCAYRCCAGTCAGAATGGCAATTATTAAAAAGTCAAGAAACAACAGATGCTGGYGAGGCTGTGGAGAAATAGGAATGCTTTTACACTGTTGGTGGGAATGTAAATTAGTTCAACCATTGTGGAAGACAGTGTGGCGATTCCTCAAGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGRGTATATACCCAAAGGAATATAAATCATTCTATTATAAAGACACATGCAYGTGTATGTTYATTGCAGCACTATTCACAATAGCAAAGACATGGAATCAACCYAAATGCCCATCAATGATAGACTGGATAAAGAAAATGTGGTACATATACACCATGGAATACTATGCAGCCATAAAAAAGAATGAGATCATGTCCTTTGCAGGAACATGGATGGAGCTGGAGGCCATTATCCTTAGCAAACTAAYGCAGGAACAGAAAACCAAATACCGCATGTTCTCACTTATAAGTGGGAGCTAAACGATGAGAACACATGGACACATGGAGGGGAACAACACACACTGGGGCCTGTCGGAGGGTGGAGGGTGGGAGGAGGGAGAGCATCAGGAAAAATAGCTAATGGATACTGGGCTTAATACCTGGGTGATGGGATGATCTGTGCAGCAAACCACCATGGCACACGTTTACCTATGTAACAAACCTGCACATCCTGCACATGTACCCCGGAACTTAAAATAAAAGTTGAAA
>L1PA15 3'-end of L1 repeat (subfamily L1PA15) - a consensus sequence
CTAATATCCAGAATSTACAARGAACTTAAACAAATTTACAAGAAAAAAACAAAMAACCCCATCAAAAAGTGGGCAAAGGACATGAACAGACACTTCTCAAAAGAAGACATWTATGTGGCCAATAAGCACATGAAAAAAAGCTCAACATCACTGATCATTAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCAYRCCAGTCAGAATGGCAATTATTAAAAAGTCAAGAAACAACAGATGCTGGYGAGGCTGTGGAGAAATAGGAATGCTTTTACACTGTTGGTGGGAATGTAAATTAGTTCAACCATTGTGGAAGACAGTGTGGCGATTCCTCAAGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGRGTATATACCCAAAGGAATATAAATCATTCTATTATAAAGACACATGCAYGTGTATGTTYATTGCAGCACTATTCACAATAGCAAAGACATGGAATCAACCYAAATGCCCATCAATGATAGACTGGATAAAGAAAATGTGGTACATATACACCATGGAATACTATGCAGCCATAAAAAAGAATGAGATCATGTCCTTTGCAGGAACATGGATGGAGCTGGAGGCCATTATCCTTAGCAAACTAAYGCAGGAACAGAAAACCAAATACCGCATGTTCTCACTTATAAGTGGGAGCTAAAYATTGAGTACACATGGACATAAAGAAGGGAACAACAGACACTGGGGCCTACTTGAGGGTGGAGGGTGGGAAGAGGGAGAGGATCAAAAAACTACCTATCGGGTACTATGCTTATTACCTGGGTGATGAAATAATCTGTACACCAAACCCCAGCGACACGCAATTTACCTATATAACAAACCTGCACATGTACCCCCTGAATCTAAAATAAAAGTTAAAA
>L1PB1 3'-end of L1 repeat (subfamily L1PB1) - a consensus sequence
CTAATATCCAGAATCTATAAGGAACTCAAACAAATCAGCAAGAAAAAAACAAACAATCCCATCAAAAAGTGGGCTAAGGACATGAAYAGACAMTTCTCAAAAGAAGATATRYAAATGGCCAACAAGCATATGAAAAAATGCTCAACATCACTAATTATCAGGGAAATGCAAATCAAAACCACAATGCRATACCATCTTACTCCTGCAAGAATGGCCATAATTAAAAAATCAAAAAATAATAGATGTTGGCGTGGATGTGGTGAAAAGGGAACACTTYTACACTGCTGGTGGGAATGTAAACTAGTACAACCACTATGGAAAACAGTATGGAGATTYCTTAAAGAACTAAAAGTAGAACTACCATTTGATCCAGCAATCCCACTACTGGGTATCTACCCARARGAAAAKAAGTCATTATAYGAAAAAGAYACTTGCACACRCATGTTTATAGCAGCACAATTYRCAATTGCAAAAATATGGAACCAACCCAAATGCCCATCAATCAAYRAGTGGATAAAGAAAATGTGRTATATATATACCATGGAATACTACKCAGCCATAAAAAAGAATGAAATAATGGCATTTGCAGCAACCTGGATGGARYTGGAGACYATTATTCTAAGTGAAGTAACTCAGGAATGGAAAACCAAACATYRTATGTTCTCACTTATAAGTGGGAGCTAAGCTATGAGGATGCAAAGGCGTAAGAATGATACAATGGACTTTGGGGACTCGGGAGATCGGGRGAAAGGGTGGGAGGGGGGTGAGGGATAAAAGACTACAAATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAAGAACTTATTCATGTAACCAAACACCACCTGTTCCCCAAAAACCTATTGAAATAAA
>L1PB3 3'-end of L1 repeat (subfamily L1PB3) - a consensus sequence
CTAATATCCAGAATCTATAAGGAACTCAAACAAATCAGCAAGAAAAAAACAAACAATCCCATCAAAAAGTGGGCTAAGGACATGAAYAGACAMTTCTCAAAAGAAGATATRYAAATGGCCAACAAGCATATGAAAAAATGCTCAACATCACTAATTATCAGGGAAATGCAAATCAAAACCACAATGCRATACCATCTTACTCCTGCAAGAATGGCCATAATTAAAAAATCAAAAAATAATAGATGTTGGCGTGGATGTGGTGAAAAGGGAACACTTYTACACTGCTGGTGGGAATGTAAACTAGTACAACCACTATGGAAAACAGTATGGAGATTYCTTAAAGAACTAAAAGTAGAACTACCATTTGATCCAGCAATCCCACTACTGGGTATCTACCCARARGAAAAKAAGTCATTATAYGAAAAAGAYACTTGCACACRCATGTTTATAGCAGCACAATTYRCAATTGCAAAAATATGGAACCAACCCAAATGCCCATCAATCAAYRAGTGGATAAAGAAAATGTGRTATATATATACCATGGAATACTACKCAGCCATAAAAAAGAATGAAATAATGGCATTTGCAGCAACCTGGATGGARYTGGAGACYATTATTCTAAGTGAAGTAACTCAGGAATGGAAAACCAAACATYRTATGTTCTCACTTATAAGTGGGAGCTAAGCTATGGGTATATACGGGCATATAGAGTGGTATAATAGACAYTGGAGACTCAAAAGGTGGAGGGTAGGAGAGGGGTGAGGGATGAAAAATTACCTATTGGGTACAATGTWCACTATTCGGGTGATGGGTACACTAAAAGCCCAGACTTCACCACTAYACAATATATCCATGTAACAAAAAKGCACYTGTACCCCCTAAATYTATAAAAATAAA
>L1MA2 3'-end of L1 repeat (subfamily L1MA2) - a consensus sequence
YTAATATCCAGAATMTATAAGGAACTCAAACAAATCAACAAGAAAAAAACAAATAATCCMATTAAAAARTGGGCAAAAGACATGAAYAGACATTTCTCAAAAGAAGACATACAAATGGCCAACARGYATATGAAAAAATGCTCAACATCACTAATCATCAGAGAAATGCAAATCAAAACYACAATGAGATATCATCTCACCCCAGTTARAATGGCTTTTATTAAAAAGACAAAAAATAACARATGCTGGYGAGGATGTGGAGAAAAGGGAACTCTTAYAYACTGTTGGTGGGAATGTAAATTAGTACARCCAYTATGGAAAACAGTTTGGAGRTTYCTCAAAAAACTAAAAATAGARCTACCATATRATCCAGCAATCCCACTRCTGGGTATATAYCCAAAAGAAAGGAAATCAGTATATYAAARAGATACCTGCACTCCCATGTTTATTGCAGCACTATTCACAATAGCHAAGATTTGGAATCAACCTAAGTGTCCATCAACRGATGAATGGATAAAGAAAATGTGGTACATATACACAATGGAGTACTATTCAGCCATAAAAAAGAATGARATCYTGTCATTTGCAGCAACATGGATGGAACTGGAGGTCATTATGTTAAGTGAAATAAGYCARGMACARAAAGACAAACAYTGCATGTTCTCACTTATTTGTGGGATCTAAAAATCAAAACAATTGAACTCATGGAGATAGAGAGTAGAAGGATGGTTACCAGAGGCTGGGAAGGGTAGTNGGAGGATTGGGGGGNGGKGRRGAGGGATGGTTAATGGGTACAAAAAAATAGTTAGAAAGAATGAATAAGACCTAGTATTTGATAGCACAACAAGGTGACTATAGTCAATAATAATTTAATTGTACATTTTAAAATAACTAAAAGAGTATAATTGGATTGTTTGTAACACAAAGGATAAATGCTTGAGGGGATGGATACCCCATTTTCCATGATGTGATTATTACACATTGCGTGCCTGTATCAAAACATCTCATGTACCCCATAAATATATACACCTACTATGTACCCACAAAAATTAAAA
>L1MA5 3'-end of L1 repeat (subfamily L1MA5) - a consensus sequence
TTAATATCCAAAATATATAAGGAACTCAAACAACTCAACAAGAARAAAACAAATAACCCAATTAAAAAATGGGCAAARGACCTGAATAGACATTTYTCAAAAGAAGACATACAAATGGCCAACAGATATATGAAAAAATGCTCAACATCACTAATCATCAAGGAAATGCAAATTAAAACCACAATGAGATATCACCTCACACCTGTTAGAATGGCTATTATCAAAAAGACAGAAAATAATAAATGTTGGYGAGGATGTGGAGAAAAGGGAACTATTGTACACTGTTGGTGGGAATGTAAATTAGTAYAGCCAYTATGGAAAACAGTATGGAGGTTCCTCAAAAAAYTAAAAATARAACTACCATATGATYCAGCAATCCCACTWCTGGGTATATATCCAAARGAATTGAAATCAGTATGTYGAAGAGATAYCTGCACTCCCATGTTTAYTGCAGCAYTATTCACAATAGCCAAGATATGGAAWCAACCTAAGTGTCCATCAAYGGAWGAATGGATAAAGAAAATGTGGTATATATACACAATGGAATACTATTCAGCCATAAAAAAGAATGAAATCCTGTCATTTGYARCAACATGGATGAACCTGGAGGACATTATGCTAAGTGAAATAAGCCAGGCACAGAAAGACAAATACCGCATGTTCTCACTCATATGTGGAAGCTAAAAAAGTTGATCTCATAGAAGTAGAGAGTAGAATAGTGGTTACTAGAGGCTGGGAAGGGTAGGGRGAGGGGGGRATAGGGAGAGGTTGGTTAAWGGRTACAAAATTACAGTTAGATAGGAGGAATAAGTTCTAGTGTTCTGTAGCACCGTAGGGTGACTATAGTTAACAAYAATTTATTGTATATTTTCAAATAGCTAGAAGAGAGGATTTTGAATGTTCCCAACACAAAGAAATGATAAATGTTTGAGGTGATGGATATGCTAATTACCCTGATTTGATCATTACACAWTGTATACATGTATCGAAATATCACACTGTACCCCATAAATATGTACAATTATTATGTGTCAATTAAAAA
>L1MA9 3'-end of L1 repeat (subfamily L1MA9) - a consensus sequence
TTAATATCCAAAATATATAAGGAACTCAAACAACTCAACAAGAARAAAACAAATAACCCAATTAAAAAATGGGCAAARGACCTGAATAGACATTTYTCAAAAGAAGACATACAAATGGCCAACAGATATATGAAAAAATGCTCAACATCACTAATCATCAAGGAAATGCAAATTAAAACCACAATGAGATATCACCTCACACCTGTTAGAATGGCTATTATCAAAAAGACAGAAAATAATAAATGTTGGYGAGGATGTGGAGAAAAGGGAACTATTGTACACTGTTGGTGGGAATGTAAATTAGTAYAGCCAYTATGGAAAACAGTATGGAGGTTCCTCAAAAAAYTAAAAATARAACTACCATATGATYCAGCAATCCCACTWCTGGGTATATATCCAAARGAATTGAAATCAGTATGTYGAAGAGATAYCTGCACTCCCATGTTTAYTGCAGCAYTATTCACAATAGCCAAGATATGGAAWCAACCTAAGTGTCCATCAAYGGAWGAATGGATAAAGAAAATGTGGTATATATACACAATGGAATACTATTCAGCCATAAAAAAGAATGAAATCCTGTCATTTGYARCAACATGGATGAACCTGGAGGACATTATGCTAAGTGAAATAAGCCAGGCACAGAAAGACAAATACTGCATGATCTCACTTATATGTGGAATCTAAAAAAGTCAAAYTCATAGAAACAGAGAGTAGAATGGTGGTTACCAGGGGCTGGGGRAKGGGGGAAATGGGAAGATGTTGGTCAAAGGGTACAAAGTTKCAGTTATGTARGATGAATAAGTTCTRGAGAYCTAATGTACAGCATGGTGACTATAGTTAATAATACTGTATTGTATACTTGAAATTTGCTAAGAGAGTAGATYTTAAGTGTTCTCACCACANACAAATGGTAACTATGTGAGGTGATGGATATGTTAATTAGCTTGAYTGTGGTAATCATTTCACAATGTATACATATATCAAAACATCACGTTGTACACCTTAAATATATACAATTTTTATTTGTCAATTATACCTCAATAAAGCTGRAAA
>L1MA10 3'-end of L1 repeat (subfamily L1MA10) - a consensus sequence
TTAATATCCAAAATATATAAAGAACTCYTACAACTCAACAAAAAAAAAACAAACAACCCAATTAAAAAATGGGCAAARGACTTGAATAGACATTTCTCCAAAGAAGAYATAYAAATGGCCAATAAGYACATGAAAARATGCTCAACATCAYTAATCATTAGGGAAATGCAAATCAAAACCACAATGAGATAYCACCTYACACCCATTAGGATGGCTATTATYAAAAAAMCAGAAAATAACAAGTGTTGRYGAGGATGTGGAGAAATTGGAACCCTTRTRCATTGCTGGTGGGAATGTAAAATGGTRCARCCACTRTGGAAAACAGTATGGHRGTTCCTCAAAAAATTAAAAATAGAATTACCATATGACCCAGCAATYCCACTYCTRGGTATATACCCAAAAGAATTGAAATCATGTTCYYAHAAAGATAYTTGTACACCMATGTTCATAGCAGCATTATTCAYAATAGCCAAAAGGTGGAAACAACCCAAATGTCCATCAATGRWTGAATGGATAAACAAAATGTGGTATATACATACAATGGAATATTATTCAGCCTTAAAAAGGAAGGAAATYCTGACAYATGCTACAACATGGATGAACCTTGARGACATTATGCTAAGTGAAATAAGCCAGTCACAAAAGGACAAATACTGCATGATTCCACTTATATGAGGTATCTAAAATAGTCAAACTCATAGAARCAGAGAGTAGAATGGTGGTTGCCAGGGGCTGGGGGRAGGGGGAAATGGGGAGTTGCTGTTCAATGGGTATAAAGTTTCAGTTATGCAAGATGAATAAGTTCTAGAGATCTGCTGTACAACATTGTGCCTATAGTTAATAATACTGTATTGTACACTTAAAAWTTGTTAAAAGRGTAGATCTCATGTTAAGTGTTCTTATCGCACAACAAAAAAATGGGGAACTTTTGGRRGTGATGGATATGTTCATTATCTTGATTGTGGTGATGGTWTCACGGGTGTNTACATATGTCAAAACTCATCAAATTGTACACWTTAAATATATGCAGTTTTTAGTGTATAATTATACCTCAACAAAGCTGTTTT
>L1MB3 3'-end of L1 repeat (subfamily L1MB3) - a consensus sequence
TTAATATCCAAAATATATAAAGAACTCYTACAACTCAACAAAAAAAAAACAAACAACCCAATTAAAAAATGGGCAAARGACTTGAATAGACATTTCTCCAAAGAAGAYATAYAAATGGCCAATAAGYACATGAAAARATGCTCAACATCAYTAATCATTAGGGAAATGCAAATCAAAACCACAATGAGATAYCACCTYACACCCATTAGGATGGCTATTATYAAAAAAMCAGAAAATAACAAGTGTTGRYGAGGATGTGGAGAAATTGGAACCCTTRTRCATTGCTGGTGGGAATGTAAAATGGTRCARCCACTRTGGAAAACAGTATGGHRGTTCCTCAAAAAATTAAAAATAGAATTACCATATGACCCAGCAATYCCACTYCTRGGTATATACCCAAAAGAATTGAAATCATGTTCYYAHAAAGATAYTTGTACACCMATGTTCATAGCAGCATTATTCAYAATAGCCAAAAGGTGGAAACAACCCAAATGTCCATCAATGRWTGAATGGATAAACAAAATGTGGTATATACATACAATGGAATATTATTCAGCCTTAAAAAGGAAGGAAATYCTGACAYATGCTACAACATGGATGAACCTTGARGACATTATGCTAAGTGAAATAAGCCAGTCACAAAAGGACAAATACTGTATGATTCCACTTATATGAGGTACCTAGAGTAGTCAAATTCATAGAGACAGAAAGTAGAATGGTGGTTGCCAGGGGCTGGGGGGAGGGGGGAATGGGGAGTTAKTGTTTAATGGGTACAGAGTTTCAGTTTGGGAAGATGAAAAAGTTCTGGAGATGGATGGTGGTGATGGTTGCACAACAATGTGAATGTACTTAACGCCACTGAACTGTACACTTAAAAATGGTTAAAATGGTAAATTTTATGTTATGTATATTTTACCACAATTAAAA
>L1MB7 3'-end of L1 repeat (subfamily L1MB7) - a consensus sequence
YTTGTATCCAGAATATATAAAGAACTCTTACAACTCAACAATAAAAAAACAAACAACCTAATTAAAAAATGGGCAAAAGAYTTGAATAGATATTTCTCCAAAGAAGATATAYAAATGGCCAATAAGCACATGAAAAGATRCTCAACATCATTAGTCATCAGGGAAATGCAAATYAAAACCACAATGAGATAYCACTTCACACCCAYTAGAATGGCTAAAATTAAAAAGACAGRMAATAMCAARTGTTGGYRAGGATGTRGAGAAAYTGGAACHCTCATACAYTGCTGGTGGGAATGTAAAATGGTACARCYACTTTGGAAAACAGTTTGGCAGTTCCTCAAAAAGTTAAMAATAGAGTTACCATATGACCCAGCAATTYCACTCCTAGGTATWTACCCAAGAGAAATGAAAACATAYRTCCAYACAAAAACTTGTACACAAATGTTCATAGCAGCATTATTCATAATAGCCAAAAAGTGGAAACAACCCAAATGTCCATCAATRATWGAATGGATAAACAAAATGTGGTATATCCATACAATGGAATATTATTCAGCMATAAAAAGGAATGAAGTAMTGATMYATGCAACAACATGGATGAACCTTGAAAACATTATGCTAAGTGAAAGAAGCCARRCACAAAAGRCCACATATTGTATGATTCCATTTATATGAAATGTCCAGAATAGGCAAATCCATAGAGACAGAAAGTAGATTAGTGGTTGCCAGGGGCTGGGGGRAAGGGGAAATGGGGAGTGACTGCTAATGGGTACGGGGTTTCTTTTTGGGGTGATGAAAATGTTCTAAAATTAGATAGTGGTGATGGTTGCACAACTYTGTGAATATACTAAAAACCACTGAATTGTACACTTTAAAAGGGTGAATTTTATGGTATGTGAATTATATCTCAATAAARCTAT
>L1MC2 3'-end of L1 repeat (subfamily L1MC2) - a consensus sequence
YTTGTATCCAGAATATATAAAGAACTCTTACAACTCAACAATAAAAAAACAAACAACCTAATTAAAAAATGGGCAAAAGAYTTGAATAGATATTTCTCCAAAGAAGATATAYAAATGGCCAATAAGCACATGAAAAGATRCTCAACATCATTAGTCATCAGGGAAATGCAAATYAAAACCACAATGAGATAYCACTTCACACCCAYTAGAATGGCTAAAATTAAAAAGACAGRMAATAMCAARTGTTGGYRAGGATGTRGAGAAAYTGGAACHCTCATACAYTGCTGGTGGGAATGTAAAATGGTACARCYACTTTGGAAAACAGTTTGGCAGTTCCTCAAAAAGTTAAMAATAGAGTTACCATATGACCCAGCAATTYCACTCCTAGGTATWTACCCAAGAGAAATGAAAACATAYRTCCAYACAAAAACTTGTACACAAATGTTCATAGCAGCATTATTCATAATAGCCAAAAAGTGGAAACAACCCAAATGTCCATCAATRATWGAATGGATAAACAAAATGTGGTATATCCATACAATGGAATATTATTCAGCMATAAAAAGGAATGAAGTAMTGATMYATGCAACAACATGGATGAACCTTGAAAACATTATGCTAAGTGAAAGAAGCCARRCACAAAAGRCCACATATTGTATGATTCCAACTATATGACATTCTGAAAAAGGNAAAACTATGGAGACAAGTAAAAAGATCAGWGATTNCTAGAGKGASTRGGARRGGGAGGGAAGAATAGGTGGAGCNCAGGGGATTTTTAGGGCAGCGAAACTATTCTGTATGATACTATAATGGTGGATACATGACATTATACATTTGTCAAAAYCCATAGAACTGTACAAYACAAAGAGTGAACCCTAATGTATGGACTTTAGTTAATAATAATGTATCAATGTTGGTTCATCAATTGTAACAAATGTACCACATTAATGCAAGATGTTAATAATAGGGTAAACTRTTGTGTGGGGGAGGGAGTATATGGGAACTCTCTGTACTTTCTGCTCAATTTTTCTGTAAACCTAAAACTGYTTCAAAAAATAAAGTCTATTAATAA
>L1MD1 3'-end of L1 repeat (subfamily L1MD1) - a consensus sequence
YTTGTATCCAGAATATATAAAGAACTCTTACAACTCAACAATAAAAAAACAAACAACCTAATTAAAAAATGGGCAAAAGAYTTGAATAGATATTTCTCCAAAGAAGATATAYAAATGGCCAATAAGCACATGAAAAGATRCTCAACATCATTAGTCATCAGGGAAATGCAAATYAAAACCACAATGAGATAYCACTTCACACCCAYTAGAATGGCTAAAATTAAAAAGACAGRMAATAMCAARTGTTGGYRAGGATGTRGAGAAAYTGGAACHCTCATACAYTGCTGGTGGGAATGTAAAATGGTACARCYACTTTGGAAAACAGTTTGGCAGTTCCTCAAAAAGTTAAMAATAGAGTTACCATATGACCCAGCAATTYCACTCCTAGGTATWTACCCAAGAGAAATGAAAACATAYRTCCAYACAAAAACTTGTACACAAATGTTCATAGCAGCATTATTCATAATAGCCAAAAAGTGGAAACAACCCAAATGTCCATCAATRATWGAATGGATAAACAAAATGTGGTATATCCATACAATGGAATATTATTCAGCMATAAAAAGGAATGAAGTAMTGATMYATGCAACAACATGGATGAACCTTGAAAACATTATGCTAAGTGAAAGAAGCCARRCACAAAAGRCCACATATTGTATGATTCCATTTACATAACATTCTTAAAATGACAAAATTWTAGARWTGRAGARCAGATTCCTGGTTGCCAGGGGTTAGGGACGGGGGTGGGGGTGGAGGGAGGTGGGCATSSTGGAGTTCCCTGTGGTGATGGAAATGTTCTGTATCTTCACTGTCACTGTATCAATGTCAATATCCTGGTTGTGATAYTGTAYTATAGTTTTGTAAGATGTTACCATTGGGGGAAGCTGGGTGAAGGGTACACGGGATCTCTCTGTAYTATTTCTTACAATTGTCTGTGAGTKTAYAATTATTTCAAAATAAAGTTTAATTTAAA
>L1MD2 3'-end of L1 repeat (subfamily L1MD2) - a consensus sequence
YTTGTATCCAGAATATATAAAGAACTCTTACAACTCAACAATAAAAAAACAAACAACCTAATTAAAAAATGGGCAAAAGAYTTGAATAGATATTTCTCCAAAGAAGATATAYAAATGGCCAATAAGCACATGAAAAGATRCTCAACATCATTAGTCATCAGGGAAATGCAAATYAAAACCACAATGAGATAYCACTTCACACCCAYTAGAATGGCTAAAATTAAAAAGACAGRMAATAMCAARTGTTGGYRAGGATGTRGAGAAAYTGGAACHCTCATACAYTGCTGGTGGGAATGTAAAATGGTACARCYACTTTGGAAAACAGTTTGGCAGTTCCTCAAAAAGTTAAMAATAGAGTTACCATATGACCCAGCAATTYCACTCCTAGGTATWTACCCAAGAGAAATGAAAACATAYRTCCAYACAAAAACTTGTACACAAATGTTCATAGCAGCATTATTCATAATAGCCAAAAAGTGGAAACAACCCAAATGTCCATCAATRATWGAATGGATAAACAAAATGTGGTATATCCATACAATGGAATATTATTCAGCMATAAAAAGGAATGAAGTAMTGATMYATGCAACAACATGGATGAACCTTGAAAACATTATGCTAAGTGAAAGAAGCCARRCACAAAAGRCCACATATTGTATGATTCCATTTATATAACATTCTTAAAACGACAAAACTATAGAGATGGAGAACAGATTAGTGRTTGCCAGGKGTTAGGGATRCAGGRAGGAGGTGGATGTGRYTATAAARRGGTAGCATGAGRGAATYTTTATGGTGATGGAACWGTTCTGTATCTTGAYTGTGGTGRTGGTTACACGAATNTATACATGTGATAAAATTGCATAGAACTAAATACACACACACACATAAGTACAAGTAAAACTGGCGAAATCTGAATAAGATTRATGGATTGTAYCAATGTCAATTTCCTGGTTKTGATATTGTAYTATAGTTTTCCAAGATGTTACCATTGGGGGAAGCTGGGTGAAGGGTACACGGGATCTCTCTGTAYTATTTCTTACAATTGTCTGTGAGTKTAYAATTATTTCAAAATAAAGTTTAATTTAAA
>L1ME2 3'-end of L1 repeat (subfamily L1ME2) - a consensus sequence
YTTGTATCCAGAATATATAAAGAACTCTTACAACTCAACAATAAAAAAACAAACAACCTAATTAAAAAATGGGCAAAAGAYTTGAATAGATATTTCTCCAAAGAAGATATAYAAATGGCCAATAAGCACATGAAAAGATRCTCAACATCATTAGTCATCAGGGAAATGCAAATYAAAACCACAATGAGATAYCACTTCACACCCAYTAGAATGGCTAAAATTAAAAAGACAGRMAATAMCAARTGTTGGYRAGGATGTRGAGAAAYTGGAACHCTCATACAYTGCTGGTGGGAATGTAAAATGGTACARCYACTTTGGAAAACAGTTTGGCAGTTCCTCAAAAAGTTAAMAATAGAGTTACCATATGACCCAGCAATTYCACTCCTAGGTATWTACCCAAGAGAAATGAAAACATAYRTCCAYACAAAAACTTGTACACAAATGTTCATAGCAGCATTATTCATAATAGCCAAAAAGTGGAAACAACCCAAATGTCCATCAATRATWGAATGGATAAACAAAATGTGGTATATCCATACAATGGAATATTATTCAGCMATAAAAAGGAATGAAGTAMTGATMYATGCAACAACATGGATGAACCTTGAAAACATTATGCTAAGTGAAAGAAGCCARRCACAAAAGRCCACATATTGTATGATTCCATTTATATGAAATTCWAGAACAGGCAAAACTAATCTATAATGNTAGAAATCAGAATAGTGGTTGCCTCTGGKGAGGGTRAATGACTGGRAAGGGRCATGAGGGAATTTTCTGGGGTGATGGAAATGTTCTATATCTTGATCGGGGTGGTGGTTACACGAGTGTATACATTTGTCAAAACTCATCGAACTGTACACTTAAAATCTGTGCATTTTACTGTATGTAAATTATAYCTCAATTTTAAAAAA
>L1ME3a 3'-end of L1 repeat (subfamily L1ME3a) - a consensus sequence
YTTGTATCCAGAATATATAAAGAACTCTTACAACTCAACAATAAAAAAACAAACAACCTAATTAAAAAATGGGCAAAAGAYTTGAATAGATATTTCTCCAAAGAAGATATAYAAATGGCCAATAAGCACATGAAAAGATRCTCAACATCATTAGTCATCAGGGAAATGCAAATYAAAACCACAATGAGATAYCACTTCACACCCAYTAGAATGGCTAAAATTAAAAAGACAGRMAATAMCAARTGTTGGYRAGGATGTRGAGAAAYTGGAACHCTCATACAYTGCTGGTGGGAATGTAAAATGGTACARCYACTTTGGAAAACAGTTTGGCAGTTCCTCAAAAAGTTAAMAATAGAGTTACCATATGACCCAGCAATTYCACTCCTAGGTATWTACCCAAGAGAAATGAAAACATAYRTCCAYACAAAAACTTGTACACAAATGTTCATAGCAGCATTATTCATAATAGCCAAAAAGTGGAAACAACCCAAATGTCCATCAATRATWGAATGGATAAACAAAATGTGGTATATCCATACAATGGAATATTATTCAGCMATAAAAAGGAATGAAGTAMTGATMYATGCAACAACATGGATGAACCTTGAAAACATTATGCTAAGTGAAAGAAGCCARRCACAAAAGRCCACATATTGTATGATTCTATTTGCATAAAATACAAAACCAGGCAAAACTAATCAATGNTGTTAGAAGTCAGGATAGTGGTTGTTCTGGGAATAGTAATGACTGTAAGGRARCATGAGAGGGCTTTCTGGGGTGCTGGTAATGTTCTGTTTCTTGATCTGGGTGCTGGTTACACGGCTGTGTTCARTTTGTGAAAATTCATYAAGCTGTACACTTATGATWTATGCAYTTTTATGTATGTATATTATAYYTCAATAAAAA
>THE1b consensus sequence
TGATATGGTTTGGCTGTGTCCCCACCCAAATCTCATCTTGAATTGTAGCTCCCATAATTCCCACGTGTCGTGGGAGGGACCCGGTGGGAGGTAATTGAATCATGGGGGCGGGTCTTTCCCGTGCTGTTCTCGTGATAGTGAATAAGTCTCACGAGATCTGATGGTTTTATAAAGGGGAGTTYCCCTGCACANGCTCTCTTGCCTGCCGCCATGTAAGACGTGMCTTTGCTCCTCCTTCGCCTTCYGCCATGATTGTGAGGCCTCCCCAGCCATGTGGAACTGTGAGTCCATTAAACCTCTTTYCTTTATAAATTACCCAGTCTCGGGTATGTCTTTATTAGCAGCATGAGAACGGACTAATACA
>MSTa consensus sequence
TGATATGGTTTGGATCTGTGTCCCCACCCAAATCTCATGTTGAATTGTAATCCCCAATGTTGGAGGTGGGGCCTGGTGGGAGGTGATTGGATCATGGGGGCGGATTYCTCATGAATGGTTTAGCACCATCCCCTTGGTGCTGTYCTCGTGATAGTGAGTGAGTTCTCATGAGATCTGGTCGTTTAAAAGTGTGTGGCACCTCCCYCCTCTCTCTCTTGCTCCTGCTCTCGCCATGTGACGTGCCTGCTCCCCCTTCGCCTTCCGCCATGATTGNAAGCTTCCTGAGGCYTCCCCAGAAGCCGAGCAGATGCCAGCGCCATGCTTCCTGTACAGCCTGCAGAACCGTGAGCCAATTAAACCTCTTTTCTTTATAAATTACCCAGTCTCAGGTATTTCTTTATAGCAATGTGAGAACAGACTAATACA
>MSTc consensus sequence
TGCTACGGTTTGAATGTTTGTCCCCTCCAAAACTCATGTTGAAACTTAATCCCCAATGTGGCAGTATTGAGAGRTGGGGCCTTTRAGAGGTGATTGGGTCATGAGGGCTCTGCCCTCATGAATGGATTAATGGATTAACGTATTAATGGATTAATTGGTTATCACGGGAGTGGGATCGGTGGCTCTATCATAAAARYCATTTTGNCTCTCGNRTGNGCCCCTTCTTGCCCTTTCACGCCTTCCGCCATGTTATGACAGAGCACAAGGCCCTCACCAGAAACCAGATGCAGCCGCCATGATCTTGGACTTCCCAGCCTSCAGAACCGTGAGCAAAATAAACCTCTTTTCTTTATAAATTACCCAGTCTATGGTATTCCGTTAAAGCAGCACGAACGGACTAAGACA
>MLT1a (MLT1a subfamily) - consensus sequence
TGCTATGGACTGAATGTTTGTGTCCCCCCAAAATTCATATGTTGAAGCCCTAATCCCCAATGTGATGGTATTAGGAGGTGGGGCCTTTGGGAGGTGATTAGGATTAGATGAGGTCATGAGGGCGGGGCCCTCATAATGGGATTAGTGCCCTTATAAAAGAGACCYCAGAGAGCTCCCTTGCCCCTTCCGCCATGTGAGGACACAGTGAGAAGGCGCCGTCTACGAACCAGGGAATGAGCCCTCACCAGAAACTGAATCTGCCGGCGCCTTGATCTTGGACTTCCCAGCCTCCAGAACTGTGAGAAATAAATTTCTGTTGTTTAAGCTACCCAGTCTATGGTATTTTGTTATAGCAGCCCGAACAGACTAAGACA
>MLT1b (MLT1b subfamily) - consensus sequence
TGTTATGGGCTGAATTGTGTCCCCCCAAAATTCATATGTTGAAGTCCTAACCCCCAGTACCTCAGAATGTGACTGTATTTGGAGATAGGGTCTTTAAAGAGGTAATTAAGTTAAAATGAGGTCATTAGGGTGGGCCCTAATCCAATATGACTGGTGTCCTTATAAGAAGAGGAAATTWGGACACAGACACGCACAGAGGRAAGRCCATGTGARGACACAGGGAGAAGGCGGCCATCTRCAAGCCAAGGAGAGAGGCCTCAGAAGAAACCAACCCTGCCGRCACCTTGATCTCGGACTTCYAGCCTCCAGAACTGTGAGAAAATAAATTTCTGTTGTTTAAGCCACCCAGTCTGTGGTACTTTGTTACGGCAGCCCTAGSAAACTAATACA
>MLT1c (MLT1c subfamily) - consensus sequence
TGTTATGGGTTGAATTGTGTCCCCCCAAAATTGATATGTTGAAGTCCTAACCCCTAGTACCTCAGAATGTGACCTTATTTGGAAATAGGGTCWTTGCAGATGTAATTAGTTAAGATGAGGTCATACTGGAGTAGGGTGGGCCCTAAATCCAATATGACTGGTGTCCTTATAARAAGAGGAAATTTGGACACAGACACGCACACGGGGAGAAGGCCATGTGAAGACGGAGGCAGAGATTGGAGTGATGCAKCTACAAGCCAAGGAACGCCAARGRYTGCCAGCAAACCACCAGAAGCTAGGAAGAGGCAAGGAACAGATTCTCCCTCACAGCCYTCAGAGGARRCCAGCCCTGCCGACACCTTSATCTCGGACTTCTGGCCTCCAGAACTGTGAGAGAATAMATTTCTGTTGTTTAAGCCACSCAGTTTGTGGTACTTTGTTACGGCAGCCCYAGGAAACTAATACA
>MLT1d (MLT1d subfamily) - consensus sequence
TGTGGTAGGCWGAATAATGGCTCCCCAAAGATGTCCACGTCCTAATCCCCAGAACCTGTGAATATGTTACCTTACATGGCAAAAGGGACTTTGCAGATGTGATTAAGTTAAGGATCTTGAGATGGGGAGATTATCCTGGATTATCCGGGTGGGCCCAATGTAATCACAAGGGTCCTTAWAAGAGGGAGGCAGAGGGTCAGAGTCAGAAGAAGGAGATGTGACGATGGAAGCAGRRAGNGAAAACTCAACGTTGCTGGCTTTGAAGATGGAGGAAGGGGCCATGAGCCAAGGAATGCGGGCAGCCTCTAGAAGCTGGAAAAGGCAAGGAAACGGATTCTCCCCTAGAGCCTCCAGAARGAACGCGGCCCTGCCGACACCTTGATTTTAGCCCAGTGAGACYCATTTTGGACTTCTGACCTCCAGAACTGTAAGATAATAAATTTGTGTTGTTTTAAGCCACTAAGTTTGTGGTAATTTGTTACAGCAGCMAYAGGAAACTAATACA
>MLT1e (MLT1e subfamily) - consensus sequence
TGTGGTAGGCAGAATTCTAARATGMTCCCAATGATCCTCGCCTCCTGGCGTAATCTCCTTGAGTGTGAGTAGGACCTGTGACTTGCTTCTAGCCAACGGAATATGGCAAAGGTGATGARATRTCACGTGATTACGCGTACGTGATTATGTAASATTCAGTCTTTGMCGTCATTCTTGCCGAGAGACTCTCCTSCTGGTYTTGAAGAAGTAAGCTGCCACGTCATGAGNNNNCNNANNAGARYGCCGCAAGGCAAGGGNNTCTAGAGCTGAGAGTCGCCCTTACTGATGGGCAGCAAGAAGCAAGCCACCTCAGTCCTACAGCCGCAAAGAACTGAATTCTGCCAACAACCTAGTGAGCTTGGAAGCAGATCCTGCCCAGTCGAGCCTCCAGATGAGANCGCAGCCCTGGCTGACGCCTTGACTGCAGCCTTGNTAGACCTTGAGCAGAGGACCCAGCTAAGCCGTGCCCAGACTCCTGACCCACAGAAACTGTGAGATAATAAATGTGTGTTGTTTTAAGCCGCTAAGTTTGTGGTAATTTGTTACGCAGCAATAGAAAACTAACACA
>MLT1f (MLT1f subfamily) - consensus sequence
TGTGGTAGCCAGCCTCCAAGATGGCCCCCAATGATCCCTGCTCCTGGTATTCACAYCCTTGTATGGTCYCYTCCTACATTGARYYAGGGCTRGTCTGTGTGACCAATAGAATAGGGCAGAAGTGATGGCGTGTSACTTCCAAGAYTARGTCAYAAAWAACACTGTGGYTTCTGCYTTGNTCTCTTCGGGCTACTCACTCTGGGGGAAGCCAGCTGCCATGCTATGAAGACACTCAAGCAGCCTATGGAGAAGTCCACGTGGSAAGGAACTGAGGTCTCCTGCCAACAGCCAGCTTCGACYTGCCAGCCATGTGAGTGAGCCATCTTGGAAGCGGATCCTCCAGCCCCAGTYAAGCCTTCAGATGACTGCAGCCCCGGCTGACATCTTGACTGCAACCTCATGAGAGACCCTGAGCCAGAACTACCCAGCTAAGCTGCTCCTARATTCCTGACCCACAGAAACTGTGAGATAATAAATGTTTRTTGTTTTAAGCCACTAAGTTTTGGGGTAATTTGTTACGCAGCAATAGATAACTAATACA
>THE1BR THE-1B Mammalian LTR retrotransposon internal sequence - a consensus
GTAAATTGGTACCAGTAGAGTGGGGCGCTGCTGAAAAGATACCCGAAAATGTGGAAGCGACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGTTTGGAGGGCTCAGAAGAAGACAGGAAAATGTGGGAAAGTTTGGAACTTCCTAGAGACTTGTTGAATGGCTTTGACCAAAATGCTGATAGTGATATGGACAATAAAGTCCAGGCTGAGGTGGTCTCAGATGGAGATGAGGAACTTGTTGGGAACTGGAGCAAAGGTGACTCTTGTTATGTTTTAGCAAAGAGACTGGCGGCATTTTGCCCCTGCCCTAGAGATTTGTGGAACTTTGAACTTGAGAGAGATGATTTAGGGTATCTGGCGGAAGAAATTTCTAAGCAGCAAAGCGTTCAAGAGGTGACTTGGGTGCTGTTAAAGGCATTCAGTTTTAAAAGGGAAGCAGAGCATAAAAGTTCGGAAAATTTGCAGCCTGACAATGCGATAGAAAAGAAAATCCCATTTTCTGAGGAGAAATTCAAGCCGGCTGCAGAAATTTGCATAAGTAACGAGGAGCCGAATGTTAATCCCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGATCTTCGCGGCAGCCCCTCCCATCACAGGCCCGGAGGCCTAGGAGGAAAAAATGGTTTCGTGGGCCAGGCCCAGGGTCCCCGTGCTGTGTGCAGCCTAGGGACTTGGTGCCCTGCGTCCCAGCCGCTCCAGCCATGGCTAAAAGGGGCCAACGTACAGCTCGGGCCGTGGCTTCAGAGGGTGCAAGCCCCAAGCCTTGGCAGCTTCCACGTGGTGTTGAGCCTGCGGGTGCACAGAAGTCAAGAATTGAGGTTTGGGAACCTCCGCCTAGATTTCAGAGGATGTATGGAAACGCCTGGATGTCCAGGCAGAAGTTTGCTGCAGGGGCGGGGCCCTCATGGAGAACCTCTGCTAGGGCAGTGCGGAAGGGAAATGTGGGGTCGGAGCCCCCACACAGAGTCCCTACTGGGGCACTGCCTAGTGGAGCTGTGAGAAGAGGGCCACCGTCCTCCAGACCCCAGAATGGTAGATCCACCGACAGCTTGCACCGTGCGCCTGGAAAAGCCGCAGACACTCAACGCCAGCCCGTGAAAGCAGCCAGGAGGGAGGCTGTACCCTGCAAAGCCACAGGGGCGGAGCTGCCCAAGACCATGGGAACCCACCTCTTGCATCAGCGTGACCTGGATGTGAGACATGGAGTCAAAGGAGATCATTTTGGAGCTTTAAGATTTGACTGCCCCGCTGGATTTCGGACTTGCATGGGGCCTGTAGCCCCTTTGTTTTGGCCAATTTCTCCCATTTGGAATGGCTGTATTTACCCAATGCCTGTACCCCCATTGTATCTAGGAAGTAACTAACTTGCTTTTGATTTTACAGGCTCATAGGCGGAAGGGACTTGCCTTGTCTCAGATGAGACTTTGGACTGTGGACTTTTGAGTTAATGCTGAAATGAGTTAAGACTTTGGGGGACTGTTGGGAAGGCATGATTGGTTTTGAAATGTGAGGACATGAGATTTGGGAGGGGCCAGGGGCGGAA
>MSTAR MSTa-Mammalian LTR internal retrotransposon sequence - a consensus
GAAWATTGGTACTGAGGAGTGGAGCATTGCTATAAAGATACCTGAAAATGTGGAAGCGACTTTGGAACTGGGTAACAGGCAGAGGTTGGAAGAGTTTGGAGGGCTCAGAAGAAGACAGGAAGATGAGGGAAAGTTTGGAACTTCTTAGAGACTTGTTAAATGGTTGTGACCAAAATGCTGATAGTGATATGGACAGTAAGGGCCAGGCTGACGAGGTCTCAGATGGAAATGAGGAACTTATTGGGAACTGGAGCAAAGGTCACTCTTGTTATACATTAGCAAAGAGCTTGGCTGCATTTTGCCCCTGCCCTAGAGATTTGTGGAAGTTTGAACTTGAGAGTGATGATCTAGGGTATCTGGCGGAAGAAATTTCTAAGCAGCAAAGCGTTCAAGATGTGACCTGGCTGCTTTTAACAGCTTACAGTCATATGCGAGAGCAAAGAAATCACTTAAAGTTGGAATTTATATTTAAAAGGGAAGCAGAGCGTAAAAGTTTGGAAAATTTGCAGCCTGGCCATGTGATAGAAAAGAAAAACCCGTTTTCTGGAGAGAAATTCAAGCAGGCTGCGGAGCGACCGTTTGCTAAAGAGATTAGCATAACTAAAAGGAAGCCAAGTGCTGATAGCCAAGACAATGGGAAAAAGGCCTCGAAGGCATTTCAGAAATCTTCGAGGTGGTCCTTCCCATCACAGGCCCAGAGGCCTAGGAGGACTGAATGGTTTCGTGGGCCAGGCCCAGGGCCCCGCTGCCCTGTGCAGCCTCGGGACACTGCTCCCTGCATCCCGGCTGCTYCGGCTCCAGCCGTGGCTCAAAGGGCCCCAGGTACAGCTCGAGCTGCCGCTTCGGAGAGTGCAAGCTATAAGCCTTGGTGGCTTCCACATGGTGTTAAGCCTGCAGGTGCACAGAATGCAAGAGTGAAGGAGGCTTGGCAGCCTCCACCTAGATTTCAGAGGATGTATGGGAAATCCTGGGTGCCCAGGCAGAAGCCTGCTGCAGGGACGGAGCCCTCACAGAGAACCTCTACTAGAGCAGTGCCAAAGGGAAATGTGGGGTTGGAGCCCCCACACAGAGTCCCCACCGGGGCACTGCCTAGTGGAGCTGTGGGAAGGGGGCCACTGTCCTCCAGACCCCAGAATGGTAGAGCCACTGGCAGCGTGCACCGCCAGCCTGGAAAAGCCGCAGGCATCAGACTCCAACCCGTGAGAGCAGCCACGTGGGCTGTGCCCAGCAAAGCCACAGGGGCGGAGCTGCCCAAGGCCTTGGGAGCCCACCCCTCGCACCAGCGTGCCCTGGATGCGAGACACGGAGTCAAAGGAGATTATTTTGGAGCTTTAAGATTTAATGACTGCCCTGCTGGGTTTCGGACTTGCGTGGGGCCTGTAGCCCCTTTCTTTTGGCCCATTTCTCCCTTTTGGAATGGAAATATTTACCCAATGCCTGTACCACCATTGTATCTTGGAAGTAAATAACTTCTTTTTGATTTTACAGGCTCATAGGTGGAAGGAACTTGCCTTGTCTCAGATGAGACTTTGGACTTTGGACTTTTGAGTTAATGCTGGAATGAGTTAAGACTTTGGGGGACTGTTGGGAAGGCATGATTGTATTTTGCAATGTGAGAAGGACGTGAGATTTGGGGGAACCAGGGGCAGAA
>MLT1R MLT1-Mammalian LTR retrotransposon internal sequence - a consensus
GATTTTGGCACTAGGAAGTGGGGTGCTTACGTAACAAATACCTAAAAATGTGGAAGCGACTTTGGAACTGGGTAATAAGTAGAGGCTGGAAGAGTTTTGAGGTACATGYTAGAAAAAGCCTAGATTTCCTTGAAGAGACTGTTGGTAGAAATATGGATATTAAAGGYAATTCTGGTGGGGGGCTCAGAAAGGAAGWGGAGAGCTATAGAGAAAGCTCCCGTCGTCTTAGAGAATACAAAAATCGTCATGAACAGAATGTTGCTAGAAATATGAATGTTAAAGGTGCTTCTGGTGAGGTCTCAGACGGAAATGAGGGAGATGTTATTGAAAATTGGAGGAAAGGTGATCCTTGTTATAAAGTAGCAAAGAACTTGGCTGAATTGTGTTCATGTCCTAGGGCTTTATGGAAAGTAGAACTTGYAAGTGATGAACTKGGATATTCAGCTGAGGAAATTTCTAAGCAAAGTGTTGAGGGCGCAACCTGACTTCTCCTAACTGCTTATAGTAAAATGTGAGAGACATAAAGATGGAANTGTTGAGTAAAAAGGAACCAGAACGTAAAGATTTGGAAAATTCTCAGCCTGATCATGTAACAGAAANNNCAATAGCGTTCTCTGGAAAGAANACCAAGGATGTNNCCGNGCAACCGTTTGCTAAAGAGATTAGRATCGTGACTCGTGGGTCCAATCAACCATCTCAGCARAARCCARGAATAGAGATGRGGTTATTTAGGAAATATCTGTGGAGGACTCTCTTATCTGATGGCTCGAACCCCTATGACTTNCATAGGAGACCGACAAGGNTTTTGAGAATNTTACACCAGCAGAAACACTGCCAACTTGGACTRAAGGGRACAGAGACGAGAAAAAATGAAGGAAGRGTGGCAGACCGAAGGTGGGGCTGTCTCGTTTCAGAGCATGGKGTCACCCCAGCGGGCCCGGAAGATGAATCTCAGGACTCAGAGGCATTAGCCTCCAGCCTTAAGATCTAATGAAGTTTGCCCTGCTGGGTTTTGGACTTGCTTGGGACCNGTGACTCCTTTCTTYYYTTCYATTTCTCCCTTTTGGAATGGGAATATCTATCCTATGCCTGYCCCACCGTTGTATTTTGGAAGCAGATAACTTGTTTNATTRCACAGGTCCACAGATGGAGAGGAATTTTGCCYCTGAATGAATCTYACCCTGAGTYTCTNCCAYACYTGATGYRGRTGATATTTCGCTGAGATTGTGGACTAAGAGTTGGTGCTGGAAGGGGTTAGACATTGGGGAGATGTTGCTATGGGATGCAGGGATTTTGCATGTGAGAAGGACATGATTATGGGGGGAGCGGAGGGCAAAC
>MLT2A1 Interspersed repeat MLT2A1- a consensus
TGTGATGGTTAATACTGAGTGTCAACTTGATTGGATTGAAGGATACAAAGTATTGATCCTGGGTGTGTCTGTGAGGGTGTTGCCAAAGGAGGTTAACATTGGACTCAGTGGGCTGGGGAGAGGCAGACCCACCCTTAATCTGRGTGGGCGCMATCYAATCAGCTGCCAGCGTGGCTAGAATATAAAGCAGGCAGAAAAATGTGAAAAGAGAGACTGGCCTAGCCTCCCAGCCTACATCTTTCTCCCGTGCTGGATGCTTCCTGCCCTTGAACATCAGACTCCAAGTTCTTCAGTTTTGGGACTCGGACTGGCTCTCCTTGCTCCTCAGCTTGCAGACGGCCTATTGTGGGACCTTGTGATCGTGTGAGTTAATACTTAATAAACTCCCCTTTATATATATCTATTCYATTAGTTCTGTCCCTCTAGAGAACCCTGACTAATACA
>MLT2B2 Interspersed repeat MLT2B2 - a consensus
TGTGATGGTTAATTTTATGTGTCAACTTGACTGGGCTAARGGGTGCCCAGATAGCTGGTTAAACATTATTTCTGGGTGTGTCTGTGAGGGTGTTTCCAGATGAGATTAGCATTTGAATCAGCGGACTGAGTAAAGAAGATTGCCCTCACCAATGTGGGCGGGCATCATCCAATCCGTTGAGGGCCTGRATAGAACAAAAAGGCAGAGGAAGGGTGAATTTGCTCTCTCTCCTTGAGCTGGGACATCCATCTTCTCCTGCCCTTGGACATTAGAACTCCAGGTTCTCGGGCCTTCGGACTYCGGGACTTGCACCAGCAGCCCCCCAGATTCTCAGGCCTTCGGACTCGGACTGARYYACGCCACCGGCTTCCCTGGTTCTCCAGCTTGCAGACGGCATATCGTGGGACTTCTCAGCCTCCATAATCACGTGAGCCAATTCCCCTAATAAATCYCYTCTATCCATCCTATTGGTTCTGTCTCTCTGGAGAACCCTGACTAATACA
>MLT2C2 Interspersed repeat MLT2C2 - a consensus
TGTGATAGTTAATTTTATGTGTCAACTTGGCTAGGCTATGGTGTCCAGACGTTTGGTCAAACAYCAGTCTAGATGTTGCTGTGAAGGTATTTTRTAGATGTGATTAACATTTAYAGTCAGTTGACTTTAAGTAAAGGAGATTACCCTCCATAATGTGGGTGGGCCTCATCCAATCAGTTGAAGGCCTTAAGAGCAAAGACTGAGGTTTCCCGAGGAAGAAGAAATTCTGCCTCAAGACTGCAACGTGGAAATCCTGCTGNTTTWCCAGCCTCCAAGCCTTCGGACTCGAACTGCAACATCARCTCTTSCCTGGGTCTCCAGCCTGCCGGCCTACCCTGCAGATTTCGGACTTGCCAGCCTCCACAATCGCGTGAGCCAATTCCTTAAAATAAATCTCTCTCTACACACACCCTATTGGTTCTGTTTCTCTGGAGAACCCTGACTAATACA
>MLT2D Interspersed repeat MLT2D - a consensus
TGTGATAGTTAATTTTATGTGTCAACTTGGCTAGGCTATGGTGTCCAGACGTTTGGTCAAACATTAGTCTGGGTGTTTCTGTGAAGGTTATTTTTTGGATGAGATTAACATTTAAATCGGTAGACTGAGTAAAGCAGATTACCCTCCCTAATGTGGGTGGACCTCATCTAATCAGTTGAAGGCCTGAATGGAAAAAAAGGGCTGACCCTCCCCCAAGTAAGAGGAAATTCTGCCTGCCTGATNGTCTTCGAACTGGAATATCAGCTCTGCGGATTTTGGACTTGCCAGCCTCCATAATTGCATGAGCCAATTCCTTATAATAAATCTATCTACTCTCTCTACACACACCCTATTGGTTCTGTTTCTCTGGAGAACCCTGACTAATACA
>LTR1 LTR from human endogenous retrovirus-like sequence (HUERS-P2).
TGATATGGGAGTGCTGGGAAGGGAAGAGCGTGGTCCCTTTAAATGATACAGAAGGGGGAAAGGAAGTGCTGTGTGGAGGAGGATGTGGTCCCTGGCTAGTACTCCAACCACACAGACCTAGGTTAAGGACAGGCATTTTTGTTGCATTTCCCAAGACCACCCTGGCCTGCCATGCCCCCATCCTGTGCCTATAAAAACCCAAGACCCTAATAAGGCAGAGATAGAAGCAGCTGGACGTCATGAGGAACACATCAGTGGAAGAGCACACAAGCGGCTAGTCATCAAGAGCTCACCAGTGGAAGAGCAGCCCGATAGGCACTGGCACGCAGGCAGGTACCGGCATGCCAGCAGGCCATCGACTGGCAAAATGATGCCGAATTTGGCTGGAGTGGTCAGAGAAGAGCCAGGTCACTGAGCTGCCGGACTCCAGGGGAAAACCATCTCCCTTCTGGCTCCCCCATCCACTGAGAGCTATTTCTACTCAATAAAACCTTGCAGTCATTCTCCAGGCCCACATGTGATCTGATTCTTCTGGTACATCAAGGCAAGAAACCCCAGGATACAGAAAGCCCTCTGTCCTTGTGACAAGGTAGAGGGTCTAACTGAGCTGGTTAACACAAGCTGCCTGTAGATGGCAAACTAAAAGAGCACCTTGTAACACATGCCCACTGGAGCTTCAGGAGCTGTAAACATTCACCCCTAGACACTGCCATGGGATTGGAGCCCCACAGCTTGCCTGTCCAAATGCTCCCCTAGAGGTTTGAGCAGCAGGGCACTGAAGAAGTGAGCCACACCCCCATCACATCCCCTGTGAGGGGAACAAGGGAACCTTTCCTATTTCA
>LTR2 LTR from human endogenous retrovirus (4-14), 3' long terminal repeat
TAAGGAAGGAGACCACCTCTCCCATTGTCTCCTGTTTCATGAGAAAGCAAAAAGTTAAAAAAAGAAGCAGAAGTGAGATCAATGGCCAGATGGTTTAGTGCCAAGAACCAGGCCTGGTAGTTAAACATCAACTCCTGACCTAACCGCTTGTGCTATCCATAGATTCCAGATATTGTATGAGGAAGACTTGTGAAACTTTCTGTTCTGTTCTGCTAGCCCCCATCACTGATGCATGTAGCTCTCAGTCATGTAGCCCCCACTTGCACAATGTATCATGACCCTTTCACGTGGACCCCTCAGAGTTGTAAGCTCTTAAAAGGGACAGGAATCTTTACTTTGGGGAGCTCGGATCTTGAGACGCGAGTCTACCAATGCTCCCAGCTGATTAAAGCCTCTTCCTTCATAGAACCGGTGTCTAAGAGGTTTTGTCTGTGACTGTTCCTGCTACA
>LTR3 LTR from human DNA related to mouse mammary tumor virus (MMTV) 3' LTR
GTTGGAGGCCGAAAGAATAGGGTCGTGACCAACTCAGTATACCACTGGAGGCTATATGAGCAAACAGCAAACTGTTCTCATGAATGCAGGATGCTGGCAAGCTGACAACTGCATCTGCCACCAGAAGGAATGCTGAGGGCAGTCATACCCCACGTGCAGTGTTCCTTGTGGTTATCTATAGGAATATCTGGAGGCTGTTGTATAAAGAAAGCAATTATGTGAGCCCGTGATAAATCAAGCAGCTGACCAACCATTACCTCTTCCTCCCTGTTGATTCTACCTAATAAATACAAAGGGCTGTAGAAGCTCAGGGCCCTTGTTCCCTAGAAGAAAGGAGCCGCCTGTCTCCTTCTTTAAAACAGATCTTTTTGTCTTTGTCTTCATTTCTGCATTTGTTCTCTTTTGTTCAGTCCCAAACCGACAGCCATA
>LTR4 LTR from human endogenous retrovirus ERV3, POL-ENV-3'LTR region
GAAGCAGGAAATATAAAAGGAAAAACAAGTAAAGGGAAAACAAGTCCTTTCCTGACCAGTCTGACTCACTCCAAAGTCCTGCTGGAGCTATGATAATTATCTGCAAGGCCAGGCAGGGGCTCCGAAGGAGGGCTCCAGGAGCAGGGATGAGAAAAACAAGTTCTCCTTATCAGTTTCCCTGTTTGAAATTCTCTCCCCATAACATTATTCTTTGTTCTGCTCTCACAACTATTTTTGTAACTATTTCTGCAAGTCTGTAAAGATTTTGTAAGTTCTTGTTTTTCTTTCTGTAGCATGGCAAGGTCACAAGACATGTTTAAGTAAGGTAGGCTCATGTTGCAAATCCTGTTGTAAAACCTGTCACGGTATGATTAACTGCCTTTGTTCTGCTTCTGTAAGACTGCTTTCTCACCTCGCAGGTTTTGCGCCAAAAACCCGACTTGCCCCTGCCTGATGCATGTATAAAAGTCAAGCCCGTCTTTGTTCCGGGCTCAGCCTTTGGATGTTAATCCGCTGGGCCAGTGGCCACCTAAATAAAACCTTCCTGTTGCACCCAGTGATCTCTCCGGCCTCCTGATACCCACAACA
>LTR5 LTR from human endogenous retrovirus 5' LTR, clone HERV-K18
TGTGGGGAAAAGCAACAGAGGTCAGATTGTTACTGTGTCTGTATAGAAAGAAGTAGACATAGGAGACTCCATTTTGTTCTGTACTAAGAAAAATTATTCTGCCTTGAGATGCTGTTAATCTATGACCTTACCCCCAACCCCGTGCTCTCTGAAACATGTGCTGTGTCAAACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCATTAAGAGTCATCACCACTCCCTAATCTCAAGTACCCAGGGACACAAAAACTGCGGAAGGCTGCAGGGGCCTCTGCCTAGGAAAGCCAGGTATTGTCCAAGGTTTCTCCCCATGTGAGAGTCTGAAATATGGCCTCGTGGGAAGGGAAAGACCTGACCGTCCCCCAGCCCGACACCCATAAAGGGTCTGTGCTGAGGAGGATTAGTATAAGAGGAAAGCATGCCTCTTGCAGTTGAGACAAGAGGAAGGCATCTGTTTCCCACCCATCCTTGGGCAATGGAATGTCTCGGTATAAAACCCGATTGTACGTTCCACCTACTGAGATAGGGAGAAACCACCTTAGGGCTGGAGGTGGGACATGCAGGCAGCAATACTGCTTTGTAAAGCATTGAGATGTTTATGTGTATGCATATCTAAAAGCACAGCATTTAATCCTTTACCTTGTCTATGATGCAAAGACCTTTGTTCACGTGTTTGTCTGCTCACCCTCTCCCCACTATTGTCTTGTGACCCTGACACATCTCCCTCTCAGAGAAACACCCACGAATGATCAATAAATACTAAGGGGACTCAGAGGCTGGTGGGATCCTCCATATGCTGAACGTTGGTTCCCCGGGCCCCCTTATTTCTTTCTCTATACTTTGTCTCTGTGTCTTTTTCTTTTCCAAGTCTCTCATTGCACCTTACGAGAAACACCCACAGGTGTGGAGGGGCAACCCACCCCTTCA
>LTR6 LTR from  human SSAV-related endogenous retroviral LTR-like element
TGGCCAGATTCCTGCTTAGATTCATCACTCACATCAAAAAGGCCAACAGAGCCCAACAAGAAACATAGGTCCCCAAGCATAGGCCAGGCCCCTTAAAACTGTGCCTAAGTCGAGTGAAGCCTTTAGATTAATTCTTTTTATTTATCTCTCTTGTTTATTTCCACCTGTTATGCCCTCCGTGCCTTCCTATTCTTCTCACTTCTTTCACGACAGGACGTGTATTTGCAAACACTACTTGGAAGGCAAGAACCTCCAAGAAAGTCTCTTTTGCAGTCGATTTATGTGCTTTGTTCCCAGAGCCTGCCCATAACCTTGAAGAACAATGCAACCTGCCGGTCATAGAAGCGGGGAACATCAACCTTGCTACAGGGTTCGGACACACAGGAAGCCGGACTGGATGTAAAAACTCTAAAAGTGAAAAAAAAAGGACTCCAGAGCATTGACTTTTACCTCTGTCCTAAAAATCACCCTGACTCTAGTTGTCACGATTCTTACCAATTTTTCTGCCCTCACTGGTTTTGTGTGACCCTAGCCA
>LTR7 LTR from human endogenous retrovirus RTVL-H2
TGTCAGGCCTCTGAGCCCAAGCTAAGCCATCACATCCCCTGTGACTAGCACATATACGCTCAGATGGCCTGAAGTAACTGAAGAATCACAAAGAAGTGAAAATGCCCTGCCCCACCTTAACTGATGACATTCCACCACAAAAGAAGTGAAAATGGCCGGTCCTTGCCTTAAGTGATGACATTACCTTGTAAGAGTCCTTTTCCTGGCTCATCCTAGCTCAAAAATCTCCCCTACTGAGCACCCTGCGACCCCCACTCCTACCCGCCAAAGAACAACCCCCCTTTGACTGTAATTGTCCTTTACCTACCCAAATCCTATAAAACAGCCCCACCCCTATCTCCCTTTGCTGACTCTCTTTTCGGACTCAGCCCGCCTGCACCCAGGTGATTAAAAGCTTTATTGCTCACACAAAGCCTGTTTGGTGGTCTCTTCACACGGACGCGCATGAAA
>LTR8 region
TGAAACCGTCTTTGCAAAATTATAACTGAGATAGTGAAAGAGATTTAACTTAACTGCTTTTATCTTGCTTTTAACCTTTAAGCTGTCCTTGTTTATTCCTGGGTGTGGGCTGAACTAACTTTTGGAGAAACTTAGTTTATAGTTTATAGTTTAAACAAAGACAGTAACAGCCCTTTCCCAAGCAGACCTCCTTCATGCCTGGGGACTAGATTGCTTCTGTAGGACTAATGTTAGCGACCAAATTAAAAATTATGGTTTAGGAGTTATGCAGTTTGAGGCTACAAAATTTTAACCCTCTCTAAACTGCTCCTAAGATCAGTGCTTGAGATATTTTGCAGACCCTGCCCTTGACGGATCAGCTGGCACCAACCAGATCAATCAACTGGCTCATCTGATCTTGCGGCCCCCACCCAGGAACTGACTCAGCGCAAAAAGACAGCTTCAACTTCCTATGATTTCATCCCTGACCAATCAACACTCCTGGCTCACTGGCTTCCCCCCACCCACCAAGTTATCCTTAAAAACTCTGATTCCTGAATGCTCAGGGAGACTGATTGGAGTAACAATAAAACTCCAGTCTCCCACACAGACGGCTCTGTGTGAATTACTCTTTCTCCATTGCAATTCCCCTGTCTTGTTGAATCGGCTCTGTCCAGGTAGTGTGCAAGGTGAACCCCTTGGGTGGTTACA
>LTR9 LTR from human endogenous retrovirus-like sequence (HUERS-P3)
AAAGAATAAATCACTGATATAAGAGTTAAGAAAAAATCACTTAGGCAGAGAGCAAGGGTATGGGAGTCCTCAGTAAGGCTTTTATTTTTAATGAAAAGCAGCCCCAAATCATTTTCTAACAAAAAGCACCCTGCAAGCTGGAAGTTTGCACAGGTGGATGCTGGCAGGAACTAAGGATTAGATATGTTCAAGATGGTGGTTCCATCTTCCCTTCTTTGCCAGCCAGGTGTACTGTAAAGGAGCAGACAAGATGGCGCTAATCAACTGGAAAGCCCAGTTGCATAAAAAGATTAGGCTTCCCTGCGCACCATGCAAACGTCATATCTGATCAAACCAATCTATGAGCTCTATGTAAATCAGACACCACTTCCTCAAACTGGACTATAAAACTCGATGGATTCACCACCAGCTGGTCTTTTCCGCTTGGAGACCCCTTCCTCTATAGAGGAAGCTGTTTCTCTTTGTCTTCTCTCCTACCCATTAAACCTCTGCTCCTAAACTCCTCATGTGTGTCCATATCCTAAATTTTCCTGGCACGTGACAACAAACCCCAGTGTATACACACCCCAGACAACATAGCCACTTCAAAATGGGGGCTCGTCTGGGAT
>LTR10 Human DNA sequence 5'-flanking minisatellite PMS32
TGTTGTAAATAAATTTTTGGTGCTGCAAAAGAAATACCACTCAAACATAAGTTTAATTTTCTCAGCAAGGCAATTTTACTTCTCTAGAAGGGTGCGACTCGCAGATGGAGCAATGGCCAGAGCACACCTGAACAAGGGAGGGGAAGGGGTTCTGATTCCTGACACAGGTAGCCCCTACTGATGCGTCGTTCCCGTATCGGCTAGGGTTGGACTGCACAGTCTAAGCTAATTCCGATTGGCTACTTTAAAGAGAGCAGGGGTATGAGCCAGAGTGGCGGGGTGAGTAGTTTGGTGGGAAGGGTGGTT
>LTR11 LTR from human HTLV-I related endogenous retroviral sequence (HRES-1/1)
TGTGTTTCTGCAGGATGTACAGCCCTCCCAGCACGGTGCTCGCTTCCCTAATGCCATTCCACAGTATTTGTTGCAGAGAAGGAAGGCAGCATGCCAGGACAGATGGAGACAGGACTAATTTGGCCTGAGGTATGTAATTTTGAACTTGAGCCTCTCTCTGGGACTGTAAAACTCCAAATCAAAGCTAATCTGAGAATACATACATCTGAAAGATGATTAGGACTGTAAACATCTATTAATATTCAACTCTGATACAAAGTACAAGTTGTTTATTCTTACCACGCAAGGCCAAAAAAGGGGAGAAAAAAAAAAAAGCACACAGCATATGCACTGGAAAGTTTCGCTTATTCAAAACAGTATTTGTCAAGCACCTCCAGTCTGGTGCTGCAGGGGAAACAAAGATTAAACAGCCAGGCGGACACTGCTCTGCTTCCAAGGTGCTTACGGTCTTAAGAAGGAGACAAGACATGTTTATAAATAGCCAAAATGCAACCCAGAAAAGGCTAAAAAACACTGAGAGGGAGGGAGAAATAAACGAAGCAAGAGGTCTCCGGAGGAAGAGATGAATGAATTAGCCTATTAATAACTCCGTCACTGTAATCCCAATGTAAAGCAAGAATTCCAAACCAGGAAAGGTCAAACTGAAGTATTTGAGGAACACAGGCGTCGCCTAAGCCCTTCACA
>LTR12 LTR from human ERV9 endogenous retroviral sequence (HRES-1/1)
TGTATCTAGTTAATCTGGTGGGGAGTTGGAGAATCTTTATGTCTAGCTAAGGGATTGTAAATACACCAATCAGCACTCTGTATCTAGCTCAAGGTTTGTAAACACACCAATCAGAACCCTGTGTCTAGCTCAGGGTTTGTGAATGCACCAATCAGCACTCTGTATCTAGTTAATCTGGTGGGGACTTGGAGAATCTTTATGTCTAGCTAAGGGATTGTGAATGCACCAATCGGCACTCTGTATCTAGCTCAAGGTTGTAAATGGACCAATCAGCACTCTATGTCTAGCTCAGTGTTTGTAAATACACCAATCGACACTCTATCTAGCTAATCTAGTGGGGACGTGGAGAACTTTTGTGTCTAACTCAGGGATGTAAATGCACCAATCAGAACCCTGTCAAAATGGACCAATAGCTCTCTGTAAAACAGACTGACTTTCTGTAAAATGGACCAATCAGCAGGATGTGGGTGGGGCCAGATAAGAGAAGAAAAGCAGGCTGCCTGAGCCAGCAGTGGCAACCCGCTTGGGTCCCCTTCCACACTGTGGAAGCTTTGTTCTTTCGCTCTTTGCAATAAATCTTGCTGCTGCTCACTCTTTGGGTCCACACTGCCTTTATGAGCTGTAACACTCACCGCGAAGGTCTGCAGCTTCATCTGAAGCAGCGAGACACGAACCCACCAGGAGGAACAAACAACTCCGATGCGCTGCCTTAAGAGCTGTAACACCGCGAGGTCTCGAGCTTCACTCCTGAGCCAGCAAGACCACAAACCCACCAGAAGGAAGAAACTCAGGAAAACAGCCGAACATCAGAAGGAATAAACTCTGGACACACCACCTTTAAGAACTGTGACACTCGCTGCGAGCGTCTGTGGCTTCA
>LTR13 LTR from a  putative human endogenous retrovirus
TGTGGGCCGCAAGCCAGGGAGCTGCCCAGGCAAGAGCCTGAAGGCACAAGCTGTTCCAGTACAGCAAAGAAAATAATTAGAATAAGAAAAGTTTTACTAGAGATAGGAAACGGATAGGATTATATCTGACTATTATTAATCATTAGTTTGTAGCATCACTCTTTGTTCTATTACCATAATGATCTCTGTTCTATTATGATTACCTTGGGGGAAACCAGGCCACACAGAGTTAGGAGCTGAAGGGCCACAGTGAGAGGTGACCAGAAGACGAGAGTGTGAGCCCTCATTCACGCCCAGAGAAGGGCCGCTGGAGGGCTCCTTGGCCTAGCGGTAATGCCAGTGCCTGGGAAGGCCCTGGTTACTTAGCAGGCCTTGGTCTAGCGGTGGCCCCAGTGCCTGGGAAGGCACCCGTTACTTAGCAGACCCGGAAAGGAATCTCCCTCTCTCCAGGGGAGACAGAGAACGCTCCGCTCCACCACCTCTTGTGGGAGGTCTGACATTAGCCAGGCCGGGCCGAGTCATCCGGAGGCTCCAACGTCTGTCTCCCTGTGATGCTGTGCTTCAGTGGTCACGCTCCTTGTTCACTTTCATGTTCAGCCTGTGCACCTGGCTCCTCCTTTTAAGTTCTTAGAAGACAGCAGTAGCAGAACTAGTAGGAGTACCACAGTCTTCGATCTTTCTGATAAGTGCATAGAAGAAACGCTGACGTTTGCTGTCCTCCCTCTCCACCTCGGCTACCACAAAGGGAAAGGCCCCCTGTCCAGTGGACACGTGACTCGCGTGACCTATCGATCATTGGAGATGACTGGCACTCCTTACCCTGCCCCCTTGCCTTGACTACAATAAATAGCAGCGCCTCCAGGCACTCGGGGCCACTACCTGTCTGTCTCCGCGCTTTGGTGGCAGTGGTCCCCCGGGCCCAGCTGTCTTTCTTCCTATCTCTTTGTCTTCTGTCTTTATCTCTTCGATCTCTCGTCTCCGCACACACGCGAAGAGAAAACCCACAGACCCGGTAGGGGTGGACCCTACA
>MER1A Nonautonomous DNA transposon
CAGGGGTCCCCAACCCCCGGGCCACGGACCGGTACCGGTCCGTGGCCTGTTAGGAACCGGGCTGCACAGCAGGAGGTGAGCGGCGGGCGAGTGAGCGAAGCTTCATCTGTAKTTACAGCCGCTCCCCATCACTCGCATTACCGCCTGAGCTCCACCTCCTGTCAGATCAGCGGTGGCACTAGATTCTCATAGGAGCGCGAACCCTATTGTGAACTGCGCATGCGAGGGATCTAGGTTGCGCGCTCCTTATGAGAATCTAATGCCTGATGATCTGTCGCTGTCTCCCATCACCCCCAGATGGGACCGTCTAGTTGCAGGAAAACAAGCTCAGGGCTCCCACTGATTCTACATTATGGTGAGTTGTRTAATTATTTCATTATATATTACAATGTAATAATAATAGAAATAAAGTGCACAATAAATGTAATGCACTTGAATCATCCCGAAACCATCCCCCCCCCCTGGTCCGTGGAAAAATTGTCTTCCACGAAACCGGTCCCTGGTGCCAAAAAGGTTGGGGACCACTG
>MER1B Nonautonomous DNA transposon
CAGGGGTCCCCAACCCCCGGGCCGCGGACCGGTACCGGTCCGTGGCCTGTTAGGAACYGGGCTGCACAGCAGGAGGTGAGCGGCGGGCGAGTGAGCATTACCGCCTGAGCTCCGCCTCCTGTCAGATCAGCGGCGGCATTAGATTCTCATAGGAGCGCGAACCCTATTGTGAACTGCGCATGCGAGGGATCTAGGTTGCGCACTCCTTATGAGAATCTAATGCCTGATGATCTGAGGTGGAACAGTTTCATCCCGAAACCATCCCCGCCCCCCGGTCCGTGGAAAAATTGTCTTCCACGAAACCGGTCCCTGGTGCCAAAAAGGTTGGGGACCACTG
>MER2 Nonautonomous DNA transposon
CAGTCGYCCCTCCGTATCCGTGYGTTCCACATCCGTGGATTCAACCAACCGCGGATCGAAAATATTCAGGYAAAAAATTGYATGGTTGCGTCTGTACTGAACATGTACAGACTTTTTTNCTTGTCATTATTCCCTAAACAATACAGTATAACAACTATTTACATAGCATTTACATTGTATTAGGTATTATAAGTAATCTAGAGATGATTTAAAGTATACGGGAGGATGTGCGTAGGTTATATGCAAATACTACGCCATTTTATATCAGGGACTTGAGCATCCGCGGATTTTGGTATCTGCGGGGGGTCCTGGAACCAATCCCCCACGGATACCGAGGGATYACTG
>MER3 Nonautonomous DNA transposon
CAGCGCTGTCCAATAGAACTTTCTGTGGTGATGGAAATGTTCTATATCTGCGCTGTCCAATACGGTAGCCACTAGCCACATGTGGCTAYTGAGCACTTGAAATGTGGYTAGTGCGACTGAGGAACTGAATTTTTAATTTTATTTAATTTTAATTAATTTAAATTTAAATAGCCACATGTGGCTAGTGGCTACCATATTGGACAGCGCAG
>MER4A a consensus
TGTGAAAGGAAAATAAATCTCGGGRCCCCMAAATCACTAAGCCAAAGGGAAAAGTCAAGCTGGGAACTGCGTYAGGCAAACCTGCCTCCCATTTTATTCCTAAATAAGATAGCTACAAAGATAAAAGGCTACATACCTCTCTCACAATTTYCYACAAGGAAATTCCTTGCGGACCTCAAGATCTTTACCCTAAAACAGTTCTGYTGAMYTTCACCTTGGCAWTGYAAATGGRTACAGGACAAAGGTACAGAACTGAAAGTCATCCCTCTGCTCACCTGAGACAAATGCATATCTGATTGCTTCCTCTGCCCTATTGTTTATGTAAAAATGCAGATTCACTGAGCCAGACTMAATTGTGTATTCAGTGAAARGCTGATCARRGACTCAAAAGAATGMAGCCWTTTGTCTCTTATCTACCTATGACCTGGAAGCCCCTRCTTCGAGTTGTCCCGCCTTTCCAGACCGAACCAATGTACATCTTACATATATTGATTGATGTCTCATGTCTCCCTAAAATGTATAAAASCAAGCTGTRCCCCGACCACCTTGGGCACATGTCGTCAGGACCTCCTGAGGCTGTGTCACGGGTGCGTCCTTAACCTTGGCAAAATAAACTTTCTAAATTGAYTGAGACCTGTCTCAGATACTTTTGGGTTCACA
>MER4B a consensus
TGTAAACCAAAAATAAAATTCTAAGKCCCCCAACCGTCTGAATGGACYCCTCCTCTYGGCCAAGGGCAYTCCAAAGYTAACCTGRAAAACTAGTTCAGGCCATGATGGGAAGTGGGGGTCGGACACGCCTCATTATACCYTCCYYCTTCTGGAATTCAGGCACAACTGACCAGCATTAACATCAACACAGACNTTAAGTCTGATAAGAAACAGTTTACAAYCTRTTCTCTCTGAAGCCTGCTANCTGAARGCTTCATCTGCACGATAAAACTTGGTCTCCGCAACCCCTTATNTCATAACCCGGACATTCCTTTCCATTGATCTYAANTCTTCAACCARTTGCCAATCAGAAAATCTTTGAATCTACCTATGACCTGGAAGCCCCCGCTTCGAGTTGTCCCGCCTTTCCGGACCGAACCAATGTACATCTTACATGTATTTGATTGATGCCTCATGTCTCCCTAAAATGTATAAAASCAAGCTGTRCCCCGACCACCTTGGGCACATGTKGTCAGGACCTCCTGAGGCTGTGTCACGGGTGCGTCCTTAACCTTGGCAAAATAAACTTTCTAAATTGAYTGAGACCTGTCTCAGATACTTTTGGGTTCACA
>MER4C a consensus
GTTRGNGTTRGNGATTGCNNNTGTGAAAGGAAAATAAAAACTTGGGACCCNAATTCACTNTGCCAAAAGGAAAAAATTAAGCTGAAANCTGAGTCATGCAAGAAACTGCCTTTCCTTTTNTTCCTAAGCAGATANCTACAGATAAAAGGTTAAATATCTCCACAGRCAGTGACTCTATGTTCACCTTYCYTATGTAAAGTGKCGATTTACTGAGCACGMKAKGRATAGATAATTGACTATTCCCCTACCTGCTCCTTTTCTCTTGCAACATGTGGATTACCAYAMCCTYYYTCTTTCCCCTCCAGCCTACYTTTCCCNTTTAAATATTGAAGCCCTCAAANTCATCNCTGGAGAAAGGCACAGACCACAGAMTSTTTYTGTRAYTYCGTGTTTCTCCTNGGCATGTCCTTAACNTTGGCAAAATAAACTNCTAAATCGATTGAGACCTGTYTCAGAYACWTTTKGGTTTACA
>MER5a a consensus
CAGTGGTTCTCAAAGTGTGGTCCCCGGACCAGCAGCATCAGCATCACCTGGGAACTTGTTAGAAATGCAGATTCTCGGGCCCCACCCCAGACCTACTGAATCAGAAACTCTGGGRGTGGGGCCCAGCAATCTGTGTTTTAACAAGCYCTCCAGGTGATTCTGATGCATGCTCAAGTTTGAGAACCACTG
>MER5b a consensus
CAGTGGTTCTCAACCYTGGCTGCAYATTAGAATCACCTGGGGAGYTTTTAAAAATCCNGATGCCCGGGCCACACCCCAGACCAATTAAATCAGAATCTCTGGRGGTGGGACCCAGGCATCAGTATTTTTTAAARCTCYYCAGGTGATTCCAATGTGCAGCCAAGGTTGAGAACCACTG
>MER6 Nonautonomous DNA transposon
CAGCAGGTCCTCGAATAACGCCGTTTCATTCAACGTCGTTTCGTTATAACGYTGATGAGRAAAAAAATCGATTCCCGGCCGGGGCCACTGTCTGTGTGGAGTTTGCACGTTCTCCCCATGTCTGCGTGGGTTTTCTCCAGGTACTCCGGTTTCCTYCCACATCCCAAAGATGTGCACGTTAGGTTCAYTGGCGTGTCTACATGGTCCCAGTCTGAGTGAGTGTGNNTGTGTGTGTGAGTGTGCCCTGCGATGGGATGGCGTCCTGTCCAGGGNTGGYTCCCGCCTTGCGCCCTGAGCTGCCGGGATAGGCTCTGGCCACCCGTGACCCTGAAMTGGAATAAGTGNRTTGRAAAATGAATRAATGAATGARTACGAATTATTATAAAATAAAAATTTGTAAAGTCTATGNTAATCTTACACATACATGACAATACATGAAATGGTAAGAAAGTGATCAGTGAGCCTGCCATATATGTTATTGCTTGTTTCTGAACTGAGTGGTGGGAGGAGGTGTTCCTAACAATGTTCACTTTGCAGACATTTATTTCTTTATTTAATCCATTATCACTATGACCACTGTCATTCAGTKATTCWCCAAAAATTGGGTAAATAATTATCWTRYTTGTTTTTATTAATCTTTCTTAAATGTATGTATAGCTCACATTTATTTCAGTGTTTAATATTAGAAGTGTTTTGGGTCTTTATTTAGAAGTTTGGTGATGTTTTTGTGACCAGAAATATGCCATAGGAACTTAACTCTTGTTTATATCAATTAGCCTRTGGTAAAATTGGTTTCGTTATACGTCGTTTCACTTAAAGTCGCAGTTTCCAAGAACCTATCAACGACGTTAAGTGAGGACTTACTG
>MER7A Nonautonomous DNA transposon
CAGTCATGCGTCGCTTAACGACGGGGATACGTTCTGAGAAATGCGTCATTAGGCAATTTCGTTGTGCGAACATCATAGAGTGTACTTACACAAACCTAGATGGTATAGCCTACTACACACCTAGGCTATRTGGTATAGCCTATTGCTCCTAGGCTACAAACCTGTACAGCATGTTACTGTACTGAATACTGTAGGCAATTGTAACACAATGGTAAGTATTTGTGTATCTAAACATAGAAAAGGTACAGTAAAAATACGGTATTATAATCTTATGGGACCACCGTCGTATATGTGGTCCATCGTTGACCGAAACGTCGTTATGCAGCGCATGACTG
>MER7B Nonautonomous DNA transposon
CAGTCATGCGTCGCTTAACGACGGGGATACGTTCTGAGAAATGCGTCATTAGGCAATTTCGTTGTGCGAACATCATAGAGTGTACTTACACAAACCTAGATGGTATAGCCTACTACACACCTAGGCTATRTGGTATAGCCTATTGCTCCTAGGCTACAAACCTGTACAGCATGTTACTGTACTGAATACTGTAGGCAATTGTAACACAATGGTAAGTATTTGTGTATCTAAACATAGAAAAGGTACAGTAAAAATACGGTATAAAAGATAAAAAATGGTACACCTGTATAGRGCACTTACCATGAATGGAGCTTGCAGGACTGGAAGTTGCTCTGGGTGAGTCAGTGAGTGAGTGGTGAGTGAATGTGAAGGCCTAGGACATTACTGTACACTACTGTAGACTTTATAAACACTGTACACTTAGGCTATACTAAWTTTATWWWWWWWWWWWWWYTTTTTCAGCAATAAATTAACCATAGCTTACTGTAACTTTTTTACTTTATAAACTTTTGCATTTTTAACTTTTGACTCTTTTGTAATAACACTTAGCTTAAAACACAAACACATTGTACAGCTGTACAAAAATATTTTCTTTCTTTATATCCTTATTCTATAAGCTTTTTTCTATTTWWAAATTTTTWATTTTTTTATTTTTTAAAANATTTTTGTTAAAAACTAAGACACAAACACACACATTAGCCTAGGCCTACACAGGGTCAGGATCATYAATATCACTGTCTTCCGCCTCCACATTTTGTCCCACTGGAAGGTCTTCAGGGGCAATAACATGCATGGAGCTGTCATCTCCTATGATAACGATGCYTTCTTCTGGAATATCTCCTGAAGGACCTGCCTGAGNCTGTTTTACAGTTAACTTTTTTTTTTAATAAGTAGAAGGAGTAYACTCTAAAATAATAATAAAAAGTATAGTATAGTAAATACATAAACCAGTAACATAGTCATTTATTATCACTATCAAGTATTATGTACTGTACATAATTGTATGTGCTATACTTTTATACAACTGGCAGCGCAGTAGGTTTGTTTACACCAGCATCGCCACAAACGCGTGAGTAMTGAGTRATATGTTGCACTACAACGTCACTAGGCGATAGGAATTTTTCAGCTCCATTATAATCTTATGGGACCACCGTCGTATATGTGGTCCATCGTTGACCGAAACGTCGTTATGCAGCGCATGACTG
>MER8 Nonautonomous DNA transposon
CAGTTGTCCCTCTGTATANNCGGGGGATTGGTTCCAGGACCCYTGTGTATACMAAAATCCGCGCATACTCAAGTCCCGAAGTCGGCCCTGCGGAACCCACGNATATGAAAAGTCGGCCCTCCATATATACGGGTTTCGCATCCCGCGAATACTGTATTTTCAATCCGCGTTTGATTGAAAAAAATCCGCGTATAAGTGGACCCACGCAGTTCAAACCCGTGTTGTTCAAGGGTCAACTG
>MER9 a consensus
TGCGAGACCAGCTCGACTGGGGACAGCCTAACCCAGTGGCACTAGAGGAATTAAAGACACACACACAGAAATATAGAGGTGTAAAGTGGGAAATCAGGGCCTCACAGCCTTCAGAGCTGAGAGCCCCAAACAGAGATTACCCATGTATTTATTAACAGCAAGCCAGTCATTAGCATTGTTTCTATAGATACTCGATTAACTAAAAGTATCCCTTATGGGAAAAGAAGGGATGGGCCGAAATGAAGGGGTGGGTCTGGCTAGTTATCTGCAGCAGGAACATGCCCTTAAGGCACAGATTGCTCATGCTATTGTTCATGGTTTAAGAACGCCTTTAAGCGGTTTTCCGACCTGGGTGGGCCAGGTGTTCCTTGTCCTCATTCCAGTAAACCCACAACCTTCCAGCGTGGGCGTTANGGCCATCATGAACATGTCACAGTGCTGCAGAGATTTTGTTTATGGCCAGTTTTGGGGCCAGTTTATGGCCAGATTTGGGGGGGCCTGTTCCCAACA
>MER11A a consensus
AGGTGTTGCGGGAAGTCAGGGACCCCGAATGRAGGGACCGGCTGRAGCCATGGCAGARGAACGTRRATTGTGAAGATTTCATGGACATTTATCGGTTCCCAAATTAATACTTTTATAATTTCTTATGCCTGTCTTTACTTTAATCTCTTAATCCTGTTATCTTCGTAAGCTGAGGATGTATGTCACCTCAGGACCACTGTGATAATTGTGTTAACTGTACAAATTGATTGTAAAACGTGTGTTTGAACAATATGAAATCAGTGCACCTTGAAAAAGAACAGAATAACAGCRATTTTTAGGGAACAAGGGAAGACAACCATAAGGTCTGACTGCCTGCAGGGTCGGGCAAAAAGAGCCATATTTTTCTTCTTGCAGAGAGCCTATAAATGGACATGCAAGTAGGGAAGATATCGCTAAATTCTTTTCCTAGCAAGGAATATTAATATTAATACCCTGGGAAAGGAATGCATTCCTGGGGGGAGGTCTATAAACGGCCGCTCTGGGAATGTCTGTCTTATGTGGTTGAGATAAGGACTGAGATACGCCCTGGTCTCCTGCAGTACCCTCAGGCTTACTAGGGTGGGGAAAAACTCCACCCTGGTAAATTTGTGGTCAGACCGGTTCTCTGCTCTCGAACCCTGTTTTCTGTTGTTTAAGATGTTTATCAAGATAATATGTGCACCGCTGAACATAGACCCTTATCAGTAGTTCTGTTTTTGCCCTTTGCCTTGTGATCTTTGTTGGACCCTTATCAGTGGTTCTGCTTTTGCCCTTTGTCCTGTTCCCTCAGAAGCATGTGATCTTTGTTAGACCCTTATTAGTAGTTCTGCTTTTTGCCCTTTGAAGCATGTGATCTTTGTACCCACTCCCTGTTCTTACACCCCCTCCCCTTTTGAAACCCTTAATAAAAAACTTGCTGGTTTGAGGCTCAGGTGGGCATCACAGTCCTACCGATATGTGATGTCACCCCCGGCGGCCCAGCTGTAAAATTCCTCTCTTTATACTGTCTCTCTTTATTTCTCAGCCGGCCGACACTTAGGGAAAATAGAAAGAACCTACGTTGAAATATTGGGGGCGGGTTCCCCCGATACTAATTNTCTT
>MER11B a consensus
TGCAAGTAGGGAAGATATCGCTAAATTCTTTTCCCAGCAAGGAATATTAATAATTAATAGCCCTGGGAAAAGAATGCATTCCTAGGGGGAGGTCTCTRAAATGGCCGCTCTGGGAATGTCTGTCTTATGTGGTTGTAGATAAGGGATGAAATACGCCCTGGTCTCCTGCAGCACCCCCAGGCTTACTAGGATGGTGGGAAATTCCAGCCTGGTAAATTTTAGTCAGACCGGTTCTCTGCTCTCGAACCCTGTCTCCTGTTAAGATGTTATCAATGATAATGCGTGCCCGAAACCTCATTAGCAATTTTAATTTCGCCTCCATCCCTGTGGTCCTGTGATCTCGCCCTGCCTCCATTTGCCTTGTGATATTTTATTGCCCTGTGAAGTATGTGATCTCTGTGACCCACACCCTGTTCGTACACTCCCTCCCCTTTTAAAATCCCTAATAAAAACTTGCTGGTTTGACGGCTCGGGGGGCATCACGGAACCTACCGACATGTGATGTCTCCCCCGGACGCCCAGCTTTAAAATTTCTCTCTTTTGTACTCTKTCCCTTTATTTCTCAGRCCGGCCGACACTTAGGGAAAATAGAAAAGAACCTACGTGAAATATTGGGGCTGGTTCCCCCGATACTAATTNTCTT
>MER20 Nonautonomous DNA transposon
CAGTGGTTCTCAACCGGGGGTGATTTTGCCCCCCAGGGGACATTTGGCAATGTCTGGAGACATTTTTGGTTGTCACAACTGGGGGGGGGGRATGCTACTGGCATCTAGTGGGTAGAGGCCAGGGATGCTGCTAAACATCCTACAATGCACAGGACAGCCCCCACAACAAAGAATTATCCGGCCCAAAATGTCGATAGTGCCAAGGTTGAGAAACCCTG
>MER21 a consensus
GCCCTYCTRTTKCAGRAAAACCTCTCTCAAACCATGTTTTYCCTCTGCTSTCATACCACGACAACAGTCGTCAACACAGAAGACTTCTGTGACCAAATGTGTGGAGGATTTTCCCCACACACCAAGCAGCAGACACCAGCTGGGCGTCCTCCAAYTCAGTTCCGACACTGTCTACCTGGAGATAGCGTCAGATCCCACAGGTTGAGGTCTCAGTCCCCAAGACTGNCCCCACCTTCAGAYACAGTTGCAAGYCCGGGYCTCTGGAACTTCTGACCAACTGGCTTCAARTTGGGGTTCCCACGACACCTCTTTAGGTTCGAYTAATTTGCTAGAGTGGYTCACAAAACTCARRGAAACACTTATTAWGTTTACTGGTTTATTAATAGATGATATTTCAAAGGATACAGATGAAGAGATACATACGGGGCGGTCTGGAAGRKCCCAGCGCAGGAGCTTCCGTCYTGATAGRRTTGGGGTTACACCCTCCAGATTCTTCACCTTCTGTYAGCCTCCACGTGTTCAGCTCTCCAGAAGCTCYCTGAACCCTGTCCTTTGGGCCTTTTATGGAGAYCTCATTGGNTGTCCATGACTGAAGCATGGACGAYTGNNAWAATGTGATTGGRCAAAAAGGGTCTGATCTAATCCCAGCAAGGYCTGTCCAGATTCTTCTTGGTCTCTTTGTGCAGCATTCCTTCCTCCAGGGTATGGGGCAGGACCYCCTCTGGAATGAGGGTCTTACGACCCACAATCAGATTATAGAGTCCTGCCTTGGGCGGMTGAAARGAGGRCARGAGAAGGYCAGAGARATATTCTGTTTCCTGAGGCCTAAAGCACCTCTACATTATAGCGAAAGACTGTAACCATGGTCATGTGAGTTATGGACAAGAACCATGGACAAAAACACATATACAATCATATCCCACCTCCCAACGC
>MER21B a consensus
TCAACACACAACACTTCTGTCACCAAACGTGTGGRRRTTTTTCCCCACACACAAACAAKTCTTCAGTTCTGCGGCGGACACCARCTGGGTGTCCTCCAATTCARTTCAGTTCTGACACTAWCTACCTRGAGATAGCGTCAGATCCCACAGGTTTAAGGGCTCAGTCCCACAAGACTGCCCCCACTTCAGATRCCAGTCGCAAGTCTRGGTTKTCACCCGTACTTCTGACCAACTGGCTATAAATTGTTCCCACGACCCCTCTTTAGGTTCGATTAATTTGCTAGAATRGCTCACARAACTCAGGGAAACACTTATATTTAYCGGTTTATTATAAAGGATATTACAAAGGATACAGATGAACAACCAGATGAAGAGATRCATAGGGCGAGGTMTGGGAGAGTCCNGGGNNCAGGAGCTTCCGTGCCCTCTCTGGSTNNRCCACCTTCCWGGCACCTCCACGTGTTCACCAACCCGGAAGCTCTCCGAACCCTGTCCTTTTGGGTTTTTATGGAGGCTTCATTACGTAGGCATGAYTGATTACATCANTGGCCATTGATTATCAACTCAACCTYCAGCYCCTCTCCYCTCCCCAGAGGTTGGAGGGTGGGGCTGAAAGTTCCAACCYTCTAATCTGCCTTGGTCTTTCTRGCGACCAGCYCCCATCCWGRAGCNTNCTAGGGGCTGCCCRCCAKGAGTCGMCTCATTAGMACAAAAGRNCRTYNCTATTACCCAGGARATTCCAAGGGTTTTAGGAGYTCTGTGTCAGGAACCGGGGTCAAAGACCAAATATTAGAT
>MER22 Human SSTI moderately repetitive DNA sequence family
GAGCTCTGGGCTTCCATACCTGTGTGGGACAGGGAAGCTCTCTCGGTCTCCATGGCCCAAGTGATGGCTGCACGCTCGGTCCAGGAAGAGGCGGAGGAAGCCCACCGCTCCTGACATTGGCCTTCTAGGAAAGGCGGTGTTGCATCCCACCTGCACTTCCTCTCTGATTCTTGAGGGCCAACCGCTTCCTCCGCTCCTGGGGAAAGTGCCTTCTAGCACCGAATCTTTTGGCTGCCACGGATGTCAGGGAGCCAACGGGACTGGGTTTTGGCTGGGTGCAGGGGAGGTTGCGTCAGGGGTACTAGCCGGCGGCGGGCTGGGGGTGGGGTGTACTTTGTCCAAACTCCCGGCTCCTCTGGCGGGCCTCCCTGAACGTGGCGTGGACTCGCGCACAGGCCCTGTCTCGCAGGTTTTCAGGTGCGCTTGGCTTTTCCTCCGCTTTGTGGGGCAGGTCTCCAGTGCCCCCGGCGCACGCCTGGACATCACTGTCCGTCTCGTCGTCGCCCCTACGGCCTCAAAGACACACGCTGCCTGCATGTGCTCTTGGGGGACGACAGTGCACATGTGGACACACTGGCTCCAGCTCGGACTCGCCTCTGTCTCTCTTTGCCCGTGTCGCCGGAAGCCGCCTCGGGTTGCCGGAGCCCTCGGGCCTTGGAGATGAAGGCAGGCCCCTGCTCCTGCCAGGAAGGAGGGAGGCAGTGGGCTCATGGGTCGGTGCCTTTGCAGCCGACAGCACGTGCGGCCCTGGGGATCTTCCTGTGCCCCGGCGAGACCCTTTCCGCCTCACTGCATTGGAACCCCATTCCCGATCACCCGCTGGGATCCATCATCGGACTCCAAGAGGAGTCCGCGCAGCCAGCCGGCACCCCGAAGCTCCTCCTTCAGCGGGAACCGAAGCAGAAGAGCGATCAAGGAGGTCCTCACCACAGGACTCCTATGGGTCCGACCCTGGGTCTCCCGCAGGCCCCTCTGGCAGTCCTCTTCCCACCCGCCGCCTCGGCTTCGCCGCCGCCGCCGCAACCTCCAGCACCGCCCCCCAGGCCCCGCAGCCGCCGTCGCCGCCATTTTTTAAAGGGTCGCAGCCTGACTCTGCGGAGTAAGGGGGGGTGGAGCGGGGGAGTCGCTCGCCAGCATGCGCGAGCCCGAGCCGCCGCTTGGGTCACAGTGAAAGCCACCGTTGCCCGGGGATGGGTCCCTGACACTTGGGGAAGTAGGAGCCCTGTGTGATCGTGCGTCTGAGTCTGGGCTGAGACCAGTCCTGGCCAGGGCAGTTACCAGGACGGTCTCGGAGGCCGGGATTCGCGGAGGGTCCAGCAGCAGGAAGAAACCCCAGGAGGAAGAAACCTCAGACAGATCGCCGGCGAGGCAGCGCGGGATCCCAGCCTCAGGCGTGCGCGGACGGTGTGCGGGTGAGTCTCCCCAAAAGTGGAGCCCTTGTGATGACGAGCACAGGTCCGCCTGCGTGCCCGTGGGCGGCTCTCTCACCGGTGGCTCTCAGTCGCGGAGAGCAGAACCCGCAGCTTCAGGGGCTGCTGCGGGAGGGTGTTCCCTGCTGTACGT
>MER25 Older LINE1 5' end region - a consensus
ACAAANTAGGGAAAAATGGCGGATAGGAGGCAGGACTAAATTGCAGCTCCCACTCGGATGGACAGAGCAGCATGTGGAGACTCACATCGTGAACTTTTGCTCCAAGAACCACCGCAGGAATATAYCAAGAAAGCCGAGAGAATYCACAGACCCTCTGAAGGAAGCAGATTGCTCCTGCARGAYCCAGGAAACGGCCCAAAAACTGTGAGTGCCCAAAGTGTGAGAAGGGRAAAATCTGCCCCCGAACACACATCCTYACTGGGGAACCTGAAGATCCAGATCACAGGAGAAGGATTTGACCTTACCTGGAGCTGAGACAATTTAGAGGGCCGAGCAAAATACAGGGGTAGAGGAAGCAGCGGGAAAAGCCCCGTGGGCACTCCCAGTCYYYAGNNAARCCCAGGGAAGCCATTTCTGACTTATCTCACAGGGGTCCCTTGGGAGGGCAGCCGGAGGAACTGGGAAAGGGSCACAGGGAAAAGAAAACCTCCAGCTGAACTTTGTAATAATTCCGACCGAKAGAGAAATTTCCTGGCCAGAACTMAGGGCAGGGCGRCGKAAGTGCTGGTGGGAGACCAGAAGTGCTGTTGGGGGGGACACGGTRGGAGTGAGACYTGCCTTTTGAGCTGCATGGGAGCTGGGTGAGGCCTGTNACTGCCAGCTTTCCCCCACTTYCCTGGTGACCTGCATGACACAGAAGAGGCAGCCATAATCCCCCTGGGAACGTAACTCCATTRGCCTGGGAACTACACCCCCATCCCTCACAGTAGCCGCAGCAAGCCCCGCCCAAGGAGACTCTGAGCTCAGACATGCCTAACCCTGCCCCCACCTGATGGTCTTTCTCTACCCACCCTGGTAGCCGAAGACAAAAGACATAAWCTCTTGGGAGCTCTAYGGCCCCACCCATCGCCTGAGAAACWGAAATAYTTAYCYWGGCMAMCTTAGGGCAAGCTTRTATCCWCCCTATACTRTCGCAGCTGATGCCCTCTTGAAAGCGCCACCTCTTGGCTGGAGGCCAACCAACTCAAGACATTACAGCAAYTCAYRACAGAATAACCCTGCCCCTARRRAAGGAGAAAACGACAGCTATCACCACTGCCTGCAACATCCTGGCTAACCAGAGGTCCTGAGTCTGTCCACGTGAYAASTTCACTRCTAKYATAACCAGCATTCGAGAAARCCAGCACACTAAGTCTATCTACAACCAAGGAATCTCACAGAGTCTAYTTCACTCCCCTGCCACCTCCATCAGAGCTGGTGCTGGTATTCACCGCTGRGAGACTTGAAGACAGGTCACATCACWGGATYCYTTGCAGACATTCCCCAGYACCAGCCCGGAGTCTGGTAGCTCCACTGGGTGGCTAGAYCCAGAAGAGCAATAACGATCACTGYAGTCCGGCTCTCAGGAAGTCCCATTCCTAGGRGAAGGGGGAGAGCACCACATCAAGGGAACACCCTGTGGGACAAAAGAATCTGAACGGCAGSCCTTGAGTCCCAGATCTTYCCTCTGACATAGCCTACCCAAATGAGAAGGAACCAGAAAAAYAATTCTGGTAATATGACAAAACAAGGTTCTTTAACACCCCCAAAARATCACACTAGCTCACCAGCAATGGATCCAAACCAAGAAGAAATCYCTGAATTGCCAGAAAAAGAATTCAGAAGGTCGATTATTAAGCTACTCAAGGAGGCACCGAGGAAGGTGAANACCAACTTAAAGAAANTTANAATATAATACAGGATATGAATGRARAAATCTYCAGWGAAANAGATAGCATAAAKAAAAAACAATCAMAACTTCWGGAAATCGAAGYACACTTATAGAAATGCGAAATGCWCTGGAAAGTCTCARCAATAGAATNGAACAAGCAGAAGAAAGAACTTCAGAGCTCGAAGACAAGGYTTTCAAATTAACCCAATCCGACAAAGACAAAGAAAAAAGAATAAGAAAATATGAACAAAGCCTCCAAGAAGTCTGGGATTATGTTAAACGACCAAACCTAAGAATAATCGGCGTTCCTGAGNAAGAAGAGAAATCTAAAAGTTTGGAAAACTTATTCGNGGAAATAATCGAGGAAAACTTCCCCGRCSTTGCTARAGAYCTAGAYATCCAAMTACAAAGAAGCTCWAWRAACA
>MER28 Nonautonomous DNA transposon
CAGTTGACCCTTGAACAACATGGGTTTGAACTGCGTGGRTCCACTTATACGCGGATTTTCTTCCATCTCTGCCACCCTGAGACAGCAAGACCAACCCCTCCTCCTCCTCAGCCTACTCAACNTGAAGACGANGAGGATGAAGACCTTTATGATGATCCACTTCCACTTAATGAATAGTAAATATATTTTCTCTTCCTTATGATTTTCTTAATAACATTTTCTTTTCTCTAGCTTACTTTATTGTAAGAATACGGTATATAATACATATAACATACAAAATATGTGTTAATCGACTGTTTATGTTATCGGTAAGGCTTCCAGTCAACAGTAGGCTATTAGTAGTTAAGTTTTKGGGGAGTCAAAAGTTATACGTGGATTTTTNACTGCGCGGGGGGTCAGCGCCCCTAACCCCCGCGTTGTTCAAGGGTCAACTG
>MER30 Nonautonomous DNA transposon
CAGGGGTGTCCAATCTTTTGGCTTCCCTGGGCCACACTGGAAGAAGAAGAATTGTCTTGGGCCACACATAAAATACACTAACACTAACGATAGCTGATGAGCTWAAAAAAAAAAAAMAATCCCAMAAAAATCTCATAATGTTTTAAGAAAGTTTACGAATTTGTGTTGGGCCGCATTCAAAGCCATCCTGGGCCGCGTGCGGCCCGCGGGCCGCGGGTTGGACAAGCTTG
>MER31 a consensus
CACCCTGCGTATCTGAYCAGGTTCCTCARTCTCCGCCGTCCCCCAGGTAATGTTTGRTCACCTGGCCTGCCTTCAGCTAGAATCCTRTTAGGTCAGTTTAGCAGAATCTCCTTACTCCTGATGTTTCCTCTTRGTAATTTTCCATCCACTGCCCCCGYACTCTGCTCYTTGGCTATAAATCCCCACTTGTCCTTGCTRTATTCGGAGTTGAGYCCAATCTCTCTCCCCTACCGYAAGACYCCATTGCAGTGGTCCCTGTAYCTRTCGNRATGGTCCTGAATAAAGTCTKCCTTACCATGCTTTAACAAGTRTYATTGAAWAATTTTTTTT
>MER33 Nonautonomous DNA transposon
CTGCGCTGTCCAATACGGTAGCCACTAGCCACATGTGGCTATTGAGCACTTGAAATGTGGCTAGTCCAAATTGAGATRTGCTGTAAGTRTAAAATATACACCAGATTTCAAAGACTTAGTACGAAAAAAAGAATGTAAAATATCTCATTAATAATTTTTATATTGATTACATGTTRAAATGATAATATTTTGGATATATTRGGTTAAATAAAATATATTATTAAAATTAATTTCACCTGTTTCTTTTTACTTTTATTAATGTGGCTACTAGAAAATTTAAAATTACATATGTGGCTCGCATTRTATTTCTATTGGACAACGCTG
>MER34 a consensus
TAGGGGAGTGAGAGATCACCTCCAACCCTCCCTCCCCTTTGCTCTTATGTGGGCTCTTTGGTGAATCTAGGAACCAAATTGACACAAGGCAGATTAACAAGAGAAAAGCATACAAATTTCATTAGTTTTACATGTGCATAGGAAYCCTCACAAAAGTCAAGYCCAGAGAAGCGGCCAAAGTAAGATGCYTTTATACTTTTTNNACAAAGNACAATAARYTNNRRAARTGTCAGAAGAAAGGGGATCTGGCTAGGGGCAGTAAATTTCTCGCGGAGTCATTAGGAGAAAAGTGTGTGTGTTGGGGTGTAAACTTAGTGGAAGATAACGGTTACTTCGGAAAGTATATTCAGGTCCAAAGCAGCCCCCAGTTTCGTCTCTGGTGATAGGTGCTATTTTCTCCCTCTGGTAAGGGACGGGTACTCCAGAGGAATCCTGGAGGAAGCTTTATGCGCTTGCTGCATGCAGGAAGAGATAGGTCATCAAACCTTTTCTGAAACTACAATTTCTCCAATATTTTCAACTCGAAATAATCAATGTACCAATTCCATATATTTTTGGGATGGCACATCCATCAGTCCTTC
>MER35 a consensus
GATGTGGCGTTTGAGTGGACACGGGGGAAGAAACAAGTAATATGAATAACATGGTGAGACAGAAAGAGTTGTGGACAGAGCTGTGGGAAATATGAGAGATAAGGAGAGAGATACTGAAAAGAGCGTTAAGAGAGATGAAGATAGGGTGTCTGGCCCATGAAGGCCCTCGTGAAGAGCAATGCTGAATAGATGAATGAACCTCAATGCCCAGCAGTGGTGGGATGAAAAGGGGATCCTGTGCAGAAACCACACTACCCATCAGAGAAGCAACTCTGCTCGTTTCCCCTTGA
>MER39 a consensus
GGGCATTANNNCTGTAGGGGCAGAAAGGTGTGATNCCTTCCCTACCCATCATAAGGGTCACGGCNNACACTCCTATAATAAAANAYAGGTTAGCAAGAGAAAAGCATAAYAGATTTATTTAATCAAAGTTTTATGTGACATGRGAGCCTTCAGAAATGAAGACMCAAAKACTCAGGGAAAACTCTATTTTTATGYTTAGATTTGATGAAGAATGGANAGCTGCGCAGAAATGTGATTRGACAAAAGGGGWATGATCTAATGGTMATARACTGRGTGTGGRAACCCAGCAAGGCTTGTCTGTTCGTATTCTTCTTGGTCTMTCTGTGCGGCATTCCTTCCTCCCGGGTATAGGGCGGGACCCCTTCTGGAATGAGGGTCTTATGACCTACWATCAGACGAGATAGGTCAGAWAATTTCTTTACGGSCAGCYCYAAGACAGAAAGGCGGGKRAWGATTAGAGGGCNAGAGAAGGTCAGAAAATGANNTTCTGTTTYCTGAGGNCTGCTTCTGAGGCTTAGAGCGCCCCAACATTNTAACAAAAGNCTGTCCNTCACCTTTACCGCTCTGAAGCTGTTCCAAAGCTGCTACATGAACCAAGGACAAAAAGCCANATANTTCAACAAAAGATATNCTTATNGTTTTAGTCACTCAGGAAACAGCAAGGCTTATAGGAGCTGAGAACCCGGAATTATG
>MER41 Medium reiteration sequence MER41
AACCTGCCAAGAACAGAAACTGGCAGAATCTGTCACAAGAAAAAGTCCCAATCAGACTTCAAGAGAGGGTTCTTGGATCTTGTGCAAGAAAGAATTCATGGGGAGTCTGAGTAAAGTGAAAGCAAGTTTATTAAGAAAGAGGAATAAGAGAATGGCTACTCCAAAGACAGAGCAGCCCTGAGGGCTGCTGGTTGCCTATTTTTATGGTTATTTCTTGATTATATGCTAAGCAAGGGGTGCATTATTTAAGCCTCCCCTTTTTAGGCCATATGGGGTTATATCCTGATGTTACTATGGCATTTGTAAACTATTATGGTGCTGGTGGGAGTGTAGCAGTGAGGACGACCAGCAGTCACTCCCATGGCCATATTGGTTTTGGTGGGTTTTAGCCGGCTTCTTTCTGCAACCTGTTTTATCAGCAAGGTTTTAAGGACCTGTATCTTGTGCTGACCTCTTATCTCATCCTGTGACTTAGAATGCCTTAACTGTCTGAGGATGCAGCCCAGTAGGTTTCAGCCTTATTTTACTCAGCTCCTATTCAGGATGAAGTTGCTCTAGTTCATATGTCTTAGACATTTCCTCCTTCCCTTT
>MER42a MER42 repetitive sequence: subfamily MER42a - a consensus
ATGTAYAGKAGGATTGATCAAATAAGTAAACGTATTNAAGATAATGGGAGCCAGGTTTCTCACTGTCGGAGAAGGGAGTTACAAATATGGAAAGGGRGAAGRCTAGAATGAACCCTGTGGTATTRGATTRGAATTGGAGGTATCAGTRTGAACTCATGRTTTTTAATATAYRYRYRYRYRTTTTTCCTAGTCCTGTCCACTGAGAGGGCCTAGAAGCAACGACACCCCAGTAGCAACGAGCACACCTAGCACCCAGATCTTGGTTTCTAATACCATTCTCCAATAAAAGGAACCAGGGCTCCTTGGAGAAATGGCTGATTCTAGGACTAGGGCAGGAAATATACAAGATGAGCCTGGAACATCTTGTARTGCCAGAAAATAAGGAAGTGCTCAAAAAACGATRRGGGTATGTCAAARGGACACAGAAGCCAACTGAAAGAGCTCCCAATGGCCAAAGCTGGAACAATTTGAGCAACAAAATAAATTATRGTAGTATTGGATTATAACTCAAAGTATAAAATAAATATCCATGAGTTCATACTAATACAAATAAATGATTAAATAAATAAATAAATTGAGAARATAAATAAGTCTTTCTTGCAGAAGAATTTCAAATAATTTATGTAGATARCCTCCCCTCAAGGAAGTGGAGCGTAAYTCCCCACTCCTTAAGTGTGGGATGGRTATAGTGACTTCCTTCYAGAAAGNATAGTNTAGGACGGAARAAAAAGTAAATTTACAGTAGAGAAACCTGACAAACACTACCTTAGCCARRTAATCAARGTTAGCATCAACGATAATARGTCATGYTGATARTATATANCCTTRATATGATGTGATAAGAATGGCACTTTACCTCCGTGGTCTTCCTCCCAAAAACCCATAACCCCAGTCTAATCATRAGAAAATATCAGACAAATTCCAACTGAGGRACATTCTACAAAATACCTGACCAGTACTCCTCAAAACTGTCAAGGTCATCAAAAACAAGRAAAGTCTGAGAAACTGTCACAGCYAARAGGAGCCTAARGAGACATGACAACTAAATGTAATGTGGTATCCTGRATGGGATCCTGGAACAGAAAAAGGACATTAGGTAAAAACTAAGGAAATMTGAATAAAGTATGTACTTTAGTTAATAATAATGTATCAATATTGGTTTATTAGTTGTGACAAATGTACYATANTAATGTAAGATGTTAAYARTAGGGGAAACTGGATGTGGGGTAYATGGGAACTCTCTGTACTATTTTTGCAACTTTCCTGTAAATCTAAAACTATTTTAAAATAAAAT
>MER42c MER42 repetitive sequence: subfamily MER42c - a consensus
ATGTAYAGKAGGATTGATCAAATAAGTAAACGTATTNAAGATAATGGGAGCCAGGTTTCTCACTGTCGGAGAAGGGAGTTACAAATATGGAAAGGGRGAAGRCTAGAATGAACCCTGTGGTATTRGATTRGAATTGGAGGTATCAGTRTGAACTCATGRTTTTTAATATAYRYRYRYRYRTTTTTCCTAGTCCTGTCCACTGAGAGGGCCTAGAAGCAACGACACCCCAGTAGCAACGAGCACACCTAGCACCCAGATCTTGGTTTCTAAATACCATTCTCCACTAAAAGGAACCAGGGCTCCTTGGAGAAATGGCTGATTCTAGGACTAGGGCAGGAAATGTACAAGATGAGCCTGGAACATCTTGTTRTGCCAGAAAATAAGGAAGTGCTCAAAAAACGATRRGGGCATRTCAAAAGGACACAGAAGCCAGCTTGAAGGGGCTCCCACTGGCCAAATCTGGGACAATTTGAGCATCAAAATAAATAATRGTAGTAATGGATTATAACTCATTGAATAAAATAAATATCCATGAGTTCATACTAATATAAATAAATGAATAAAAWAAATAAATGAGAARGGAAAGCTCTTCTTACAGTNGAATGCCAANTAATAAATNTAGAARGAATAATAATAGAAAAATCACCATTAGGCAAAYACCGCAGTAATAACTGTTTYAGGCAAGATCCATCGATAGATGCTMTAATTAGTGGGCGAAARTTTGATGAGAAACGGRATATTTGCATAGTCTCAAAGTATCTCCTCACAAGATATTTATTAATTACAAAGGGAAAAAYAGTGACTTTACAGTAGAGAAACCTGGCAGACACCACCTTAACCAAGTGATCAARGTTANCATCACCAAAAATGAGACAAAYTGACATCATGCGCYNCCTGATRTGATGCGCCGAGAAGAACAACATSGCTTCTGTGATATTCCTGCCAAAGATGCATAACCTGAATCTAATCATRAGAAAATATCAGACAAACCCAAATTGAGGGACAKTCTACAAAATAACTGGNCTGTACTCATCAAAARTGTCAAGGTCATAAAAGACAARGAAAGACTGAGGAACTTTCTACNTTTGACGGAAGACTAGARNCATGACAACTAAATGCAACGCGGGATTCTGRANTGGATCCTGGRTCGAGAAATAGTGGGAGTTTKTAYCTATAAAGGACATTATTGGGACANTTGRCGAAATTTGAATANGGTCTGNAGATTAGATAATAGTATTGTATCAATGTTAATTTCCTGATTTTGATAATTGTAYTGTGGTTATGTAAGAGAATGTCCTTGTTTTTAGGAAANACACACTGAAGTATTTAGGGGTAAAAGGNCATSATGTCTGCAACTTACTCTCAAATRGTTCAGRAAAAAAAATNNATATAYATAARYAGAGAATGATAAAGCAAATGCGGYAAAATGTTAACAATTGGTGAATCTGGGTGAAGGGTATACGGGWGTTCTTTGTACTATTCTTGCAACTTTTCTGTAAGTTTGAAATTACTTCAAAATAAA
>MER43 Homo sapiens clone DOE1-35 MER repetitive sequence - a consensus
CCCAAGCCCAGTAACGCTGTGGCTCTTGCAGACTCNTAGAGGTACTGCCTTNRTGGTCTTGGATAAGATCTGGAAGAATTCCCTGGATTACCAGGCAGAGACTCTTGTTCTCTTCCCTTACTTTCTCCCAAACAAACAAATGGAGTCTCTCTCTCTNTCTGTGCTGAGCTGCCTAGANCTGNGGGWGGGGTGACACAAGCACCCCTGTGGCCACCACCACTGGGACTGTGCTGGGTCAGACCTGAAGCCAGCACAGCATTGGGTCTCACCCA
>MER44A Nonautonomous DNA transposon
CAGTAGTCCCCCCTTATCCGCGGGGGATACGTTCCAAGACCCCCAGTGGATGCCTGAAACCACAGATAGTACCGAACCCTATATATACTATGTTTTTTCCTATATATATATACCTATGATAAAGTTTAATTTATAAATTAGGCACAGTAAGAGATTAACAATAACTAATAAAATAGAACAATTATAACAATATACCGTAATAAAAGTTATGTGAATGTGGTCTCTTTCTCTCAAAATATCTTATTGTACTGTACTCACCTATTTTCGGACCGCGGTTGACCATGGGTAACTGAAACTRCGGAAAGTGAAACCGCGGATAAGGRGGGACTACTG
>MER44C Nonautonomous DNA transposon
CAGTAGTCCCCCCTTATCCACGGGGGATACGTTCCAAGACCCCCAGTGGATGCCTGAAACCACGGATAGTACCGAACCCTATTGCTATCAGTCTTTTGGAACATGTTTCTGTTCATGTCTTCTGCCCACAAATTTAATGCCTCTTCCACCTCAACTAAACACGTATCATGCACTCCGGCCATCACTTTTGCAGTTTGAGGTATGACATCAAAACTAGCATGAATTTATTTTTCCTTCTTCACAATTCCAAAGATGGAAGATTCTTTCTTACCGTAGATCTTAGCAACCTCAGCATACGATTATTTTTCYTTTCTTTTTAAGTCAAGAACTTTCACCTTTTCGCTTAAAGGAAGCACTTTACAGCTTCTYTTTGGCATGTCCGAATTGCCACCAACACTACTCTTGTGCTTTTGGGCCATTATTAAGTAAAACGGGAGTTACTTGAACACAAGCACTGTGATACCAAGACAGTCGGTCTGATAACTGAGATGGCTACTAAGTGATTAACAGGCAGGTAGCGTANACGGCGTGGATACGCTGGACAAAGGGATGATTCACATCCCGGATGGGACGGCGCGAAATTTCATCACGCTACTCAGAACGGCGCGYAATTTAAAACTTATGAATTGTTTATTTCTGNAATTTTCAATTTAATATTTTCGGACCGCAGTTGACCACGGGTAACTGAAACCACAGAAAGTRAAACCACGGATAAGGGGGGACTGCTG
>MER45 Nonautonomous DNA transposon
CAGGACCGGCTACATAATTTGCGGGRCCCAGTGCAAAATGAAAATGCGGGGCCCCTTGTTCAAAAATTATTAAGAATTTCAAGACGGCGACAGCAGAGCATTAAACCAAGCACGGGGCCCTTCTRAGCGCGGGGCCCTGTGTGACTGCACAGGTCGCACGCCCATGAAGCCGGCCCTG
>MER46 Nonautonomous DNA transposon
CAGGTTGAGTATCCCTTATCCAAAATGCTTGGGACCAGAAGTGTTTCGGATTTCGGATTTTTGGATTTTGGAATATTTGCATTATACTTACCGGTTGAGCATCCCAAATCTGAAAATCCGAAATCCAAAACGCTCCAATGAGCATTTCCTTTGAGCGTCATGTCGGCGYTCAAAAAGTTTCGGATTTTGGAGCATTTCGGATTTCGGATTTTCGGATTWGGGATGCTCAAYCTG
>LOR1 Human low copy repetitive sequence - a consensus
TGTTACTGAACACCAGGGGTTCGGTCTAGGTCCTGCTGCTCGCCACACAGAAAGCCAATCACTGAGACAATAAGTATTGCCAAGGAAGAAGGCTTTAATCGGGTGCTGCAGCCGAGGAGACGGGAGATCAGTCTCAAATCCATCTCCCTGACCGACTAAAATTAGGGGTTTATATAGCAGGGAAGAAATGTAACCGTGTGTGGGAAAACAGGAATTAGGGAGGGGTAAGGAAGAGAATTTGGTCAACAGGAAGCAGGTGGTCAGTTAGGCAATCATGATGGGTGAGGGGTCTGACGTCTCATTGTCCGGATGCAGTGATCTGGTAAGTTTCAGCTCCTTGATACTATCTGGGAGGCCTGATGGTTGGTTTCCTGAAAAAGGAACTCAGATAAGACAAATGTAACTTTCTCGAGTTTTAAGACTGGGAGAATCARTTTCTATGTTTATTCAAAGAAACCATAAACATCAGTTCTATGGGACAATTGGGTCAGTTTCAATTG
>SVA Composite retroposon
CTCCCTCTCCCTCACCCTCTCCCCATGGTCTCCCTCTCCCTCTCTTTCCACGGTCTCCCTCTGATGCCGAGCCGAAGCTGGACGGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCTTGCCGAGTGCCTGCGATTGCAGGCGCGCGCCGCCACGCCTGACTGGTTTTCGTATTTTGTTAGTGGAGACGGGGTTTCGCTGTGTTGGCCGGGCTGGTCTCCAGCTCCTAACCGCGAGTGATCCACCAGCCTCGGCCTCCCGAGGTGCTGGGATTGCAGACGGAGTCTCGTTCACTCAGTGCTCAATGATGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCGCTACAACCTCCACCTCCCAGCAGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGTGTCTCCGCCTGGCCACCCATCGTCTGGGATGTGAGGAGCGTCTCTGCCCTGCCGCCCATCGTCTGAGATGTGGGGAGCACCTCTGCCCGGCCGCCCCGTCCGGGATGTGAGGAGCGTCGCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCGCTCCATCTGAGAAGTGAGGAGCCCCTCCGCCCGGCAGCCGCCCTGTCTGAGAAGTGAGGAGCCCCTCCGCCCAGCAGCCACCTGGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCAGCCCGGCCAGCCGCCCCGTCCGGGAAGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCACTTTGCCCGGCCAGCCACTCTGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCCAGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCTGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCGCCTACTGGAAAGTGAGGAGCCCCTCTGCCCGGCCACCACCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAAGGGGCCATGATGACAATGGCGGTTTTGTGGAATAGAAAGGGGGGAAAGGTGGGGAAAAGATTGAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAGGTAGACCTGGGAGACTTTTCATTTTGTTCTGTACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTGATCGGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTATCCACTCAGGGTTGAATGGATTAAGAGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCCTTAAGAGTCATCACCACTCCCTAATCTCAAGTACCCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCTGTGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATGATCAATAAAAAAAAAAAAA
>ALR Human alpha repetitive DNA - a consensus
AATTCTCAGTAACTTCCTTGTGTTGTGTGTATTCAACTCACAGAGTTGAACGATCCTTTACACAGAGCAGACTTGAAACACTCTTTTTGTGGAATTTGCAAGTGGAGATTTCAGCCGCTTTGAGGTCAATGGTAGAATAGGAAATATCTTCCTATAGAAACTAGACAGAAT
>MSR1 Human 37 BP minisatellite repeats, specific to chromosome 19
AGTCAAGACCCCCAGCCCCTCCTCCCTCAGACCCAGGAGTCAAGAACCCCCAGCCCCTCCTCCCTCAGACCCAGGAGTCAAGAACCCCCAGCCCCTCCTCCCTCAGACCCAGGAGTCAAGACCCCCCAGCCCCTCCTCCCTCAGACTCATGAGTCCAGACCCCCAGCCCCTCCTCCCTCAGACCCAGGAGTCCAGACCCCCAGCCCCTCCTCCCTCAGACCCAGGAGTCCAGACCCCCAGCCCCTCCTCCCTCAGACCCAGGAGTCCAGGCCCCACCCCTC
>TAR1 Human telomere associated repeat sequence, complete sequence
GATCAACAGTGAGGAGGTCCCACAAGGCTAAGTGGGGCAAGTCGGGGACCTAAGGCAGTAGCAGGAAAACCAAAGAAAACAGGCGGAGACTTGAGACAGAGGCAGGAATGTGAAGAAGTCCAAAATAAAAATCCCTGCACAGGACTCTTAGGCTGTTATCATGCACTATCAGCCTACTCCTCCCTATTTTTGTACAATAAGCTCTTTACACTGTATTTCTTTTCAATGAAGTTATCTTCCATCTTTGTACTGCCTCTTGGTGAAAAGCTGTCTTCCAAGTTAATAACTGGGACATCAGCTCTCTGCAGTAATAGCTCCTTTTCAGTTTTAATTTGCAGAACTGATGGGGATTAATAACTGGCGCTCTGACTTTAAGTGGTGCAGGAGGCGGCCAGTAGGGGACGCCAGCCGTTACGCCGGGAGCAAGAGGGCCCTGCGTAGTCCCCATCTGCCTGCATGTGGCGTGCAGCCACGACAATGGCAGCAAGAGGGCCCGGCAGTGTGCCCAGCTGCCAGCAGGCGGGTGTGCTGCCACTATAATGTGAGGAAGAGGGCCCTGCAATGTCCCTAGCTGCCAGCAGGCGGCGTGCCACCACTATACTGCGAGCAAGAGAGCCCTGCCGTGCCCCGGCGCCAGCAGGGGGCGCTGGACAGCACTGTAAGCAAGAGGGCCCTGCAGTTGTCCTAGTCGCCAGTAGGGGACGCAATGGCAGAGCACCGTGGGCAAGCTGGTCCTGTAGTGCCCGGCTGCAAGCAGGGGGCGCCCGAAACGGGCTTTTCAGATTACTCAGGTTCCACTCGTCTCTGCGCCGCCGGGGACGTGTGTCTCTGCGCGTGCACCGCGCCACCCCCGCGCTCCCCGCCCGGCGGCGCGCGACTGTGCGACTGCAACACTCCCCGCCACCCTCAGCCCAGCGACGTGCGTCTCTGCGCCTGCGCCGCGCCTCACTCCCGCCCGCTCAGCGACCCCTCCCTTCCGGGGAGGCGCCGGCGTGCGTCTACGCCCTGCGCCGCGTCTCCCCAACAGCGGCGCGCCTCTCTGCGCCTGCGCCGGCGCGCCGCGCCTCTCTGCGCCTGCGCCGGCGCGCCGCGCCTCTCTGCGCCTGCGCCGGCGCCCCGCGCCTCTCTGCGCCTGCGCCGGCGCCCCGCGCCTCTCTGCGCCTGCGCCGGCGCCCCGCGCCTCTCTGCGCCTGCGCCGGCGCCCCGCGCCTCTCTGCGCCTGCGCCGGCGCCCCGCGCCTCTCTGCGCCTGCGCCGGCGCCCCGCGCCTCTCTGCGCCTGCGCCGGCGCCCCGCGCCTCTCTGCGCCTGCGCCGGCGCCCCGCGCCTCTCTGCGCCTGCGCCGGCGCCCCGCGCCTCTCTGCGCCTGCGCCGGCGCCCCGCGCCTCTCTGCGCCTGCGCCGGCGCCCCGCGCCTCTCTGCGCCTGCGCCGGCGCCCCGCGCCTCTCTGCGCCTGCGCCGGCGCCCCGCGCCTCTCTGCGCCTGCGCCGGCGCCCCGCGCCTCTCTGCGCCTGCGCCGGCGCCCCGCGCCTCTCTGCGCCTGCGCCGGCGCGCCGCCTTTGCGAGGGCGGAGTTGCGTTCTCTTTAGCACACACCCGGAGAGCATCGCGAGGGCGGAGCTGCGTTCTCCTCTGCACAGACTTCGGGGGTATTGCGAAGGCGGAGCAGAGTTCTTCTCAGGTCAGACCCGGGCGGGCGGGCTGAGGGCACTGCGAGGGTGGAGCTGCGTTCTGTTCAGCACAGACGTGGGGGGCACCGTAAAGGCGGAGCAGCATTCTTCTCAGCACAGACGTTGGGGGTACTGCCTGCCTTTGGGATAACTCGGGGCCGCATCGAGGGTGAATAAAATCTTTCCCGTTTGCTGCCCTGAATAATCAAGGTCAGAGACCAGTTAGAACGGTTTAGTGTGGAAAGCGGGAAACGAAAAGCCTCTCTGAATCCTGCGCACCGAGATTCTCCCAAGGCAAGGCGAGGGGCTGTATTGCAGGGTTCAAGTGCAGCGTCAGAACTCAAATGCAGCATTCCTAATGCACACATGACACCCTAAATATAACAGGCATATTACTCATGGAGGGTTAGGGTTCAGGTTCGGGTTCGGGTTCGGGTTCGGGTT
>CER Human D22Z3 repetitive DNA (centromeric DNA)
CTGCAGAACACTACTTCCAGGGTCTAAATGTCTGTCCTTCACATAGGATTCCAGAACACTGCTACGAGAGTGTGAATGTTTGTCCTTCACATAGCATTTCACAACTGCCATGGTCTGAATGGTTGTCCCTCACATAGTATTCCAGAACACTGCTATGAGGGTCTGAATGTTTGTACCTCACATAGGATTCCAGAACACTGCTATGAGGGTCTGAATGTTTGTACCTCACATAGGATTCCAGAACACTGCTATGAGTGTTTGAAAGTTTGTCCCTCACATAGGATTCCAGAAGACTGCTGCTGGGGTCTGAATGTCTGTCCCTCACATCGGATTCCAGAACCCTGCTGCTGGGGTTTGAATGTCTGTCCCTCACATAGAATTC
>BSR Human beta satellite DNA - a consensus
GATCAGTGCAGAGATATGTCACAATGCCCCTGTAGGCAGAGCCTAGACAAGAGTTACATCACCTGGGT
>HSATII Human satellite II DNA
ANTCCATTCGGGTCCATTCGATGATGATCACACTGGATTTCATTCCATAATTCTATTCG
>HSATI Human satellite I DNA HinfI fragment
GANTCNGCTCNNGACACAACTCTCTGAGCCTTCGGTGACCTTTCNGTCTNGTGTAANNGCACTCNTGTCYYCCTGGCAGCAGTTGGACCTCGCGATGTGGATTGTGCCCTCACCCAGCNNTNTTTATGCCCTNTCNCCATGGTGACNGGATTAGGGGTCTCCTGCTCTTCNNTCCTAAGGACCACTGTCTGTGCTGTGTCTTTCAAAGGTCAGAAGAGATTGNACCTTTGTGTTTTTATTTTCCCTGTGTTTGCTTTTTCTCNNTGGGGAACCTGTGTTGCTGCTTTGAAGGTATATTCATACTGGCCNNTCANNTGNNCAACATCNNCAAANTNACTAGTTANGGCTTTCAAAATATGNTATTTCAAAAAATTANCCGTCTGTATTTTCCATATGCAGTTATAAGTAGGTTTCATCGGTTATGTTTTATTCCTCAGTTTATACATTTGATTATTGTACCAAGCAGAGTACCTTTGAAATTTTTTTTCATTTAAAAAATATGGATCTTTAAAAAAAAATTATATATGATATATATTACATGTTATGTGCTATGCCTTATNTGTAACATATAACCTCATATATTTTNTATGTCATAGTATATAATATTTATCCTGTGTCATCTTATATATAC
>R66 A 66bp tandem repeat - a consensus
ACAGAGTGCTGATTGGTGCRTTTACAAACCTTTAGCTAGACACAGAGCGCTGATTGGTGCGTTTTT
>SAR Human satellite I DNA
ACATAAAATATCAAAGTACATCAAATATATATTTTATTCTGT
>SN5 Human centromeric SN5 satellite DNA sequence
CTTCCCTTCAGGGACCTCAAAGTGACCAGCTTCCCCTTGAAGAATGACTCTCCAAGGCCCAGGAGCCCAGCTTCTGGGCCTCCAAGCCAGGCCATCTGGCGAGGGAGTCGGTGGACGTGCCCTGGCTTCTTCCATGTTGAGTTGGTACTACCCACCAAGGGGGGTAGAGAGGCGAGCAGATGTTGTCTCTGGCCTGTGTCTTGTTATCATGGTGCTGACTAGGCCTGGTACAGGGCCCTGATGGGGTTGTCCTGGGTGGTCACGGGGGTGATGAGAAGAAGATGCAGAATGGATTGCTGTGAGGATGAATGAGACGACTGTCAGTACAGACAGGCACACGGTGAAGTGTTCAGGGATTCCCCTCAGTAGCTGCCCAGACCCAAAACCTGACTCCTGAGTCACGTTACTGTCCCACTATACGTTAAGAGGAGGGAAAGCTGGGTCGCGCAGGTCCC
>HY3 Ro(hY3) pseudogene - a consensus
TAGTCAANTGAAGCAGCGGGAGTGGAGAAGGAACAAAGAAATTTGTAACTGGTTGTGATCAATTAGTTGTAAACANCGCTGCACTCCAACCAGCC
>HIR Human HINF family repeat DNA
GATTCCCAGGTGCACAGAGATCCTAATCCGCATCCATCGAAATCTCACAAAGTGTCCATAAATCACTCAGGGAGGGCCCCCATGGATACAGGGCCGTAGTAGGATGCTCCTATAGTGGGCATTAATATGAGAATGACCGAAAAGTGCATTTAGGACCATATTATAATTTTCGGGTTCCCAGGTGCACGTTTCCAATAACCAGGTGCACGGATGTATAGGGTCCCCCCCATGGATAGAGGTCCGTGTTAGGGTGCTCCATATCGGGCATGAATATCAGGAACACCGGCATGTGCACTTAGGACCATGTTTTAATTTTTCA
> satellites 2 and 3
GGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAAT
>IVR Repetitive sequence from human involucrin gene - a consensus
CAGGAGGGGCAGCTGAAGCACCTGGAGCAG
>7SK Human family A3 repeated element DNA; 7SK RNA pseudogene
GATGTGAGGGCAATCTGGCTGCGACATCTGTCCCCACTGATTACCAGGGTTGATTCGGCTGATCTGGCTGGCTAGGCGGGTCTCCTCTTCCTCCCTCAGCCCTCCATGTGTGTACCTCCTGAAGCGGACTGGTCTTCAGTCAAGGGTAGACGAGTAGCTGTGCTCCCCTGCTAGAACCTCCAAACAAGCTCTC
>KER Human K element interspersed repeat DNA
AGCTCATCTGTCCACTGAAGATGCTTGGACAGAGTTAGGAATGCTTCCTGGGAGAGGTAACATTTGAGACTTTCCTGGAAGAATGGTCAGAGTAAACCAAGTAAGTAGGAATGGAAAGAGGATGGGAGGCCCCAGCTTCCCAGAGGCATAAGGTGAGGANGNCCCTATGCATTCAGATGTGGCCCACCCTGGGGTCTGGTGGACTAAAGNCTTGGACACCCCAGATCAGCCTTAGTGGGATGAGGCAGGAAAGACAGCTGAGGGTCAGAACCCAGGCAGGTCCAATGCCAGGGTGGGCATTTCGAGTTGGTGAGACATTTCACCCTGGTGCCAAGCT
>XTR Repetitive element X-2 from human alpha-fetoprotein gene
TTAATTTGAGAGAAATTAATTATTCTGCAACTTAGGGACAAGTCATGTCTTTGAATATTCTGTAGTTTGAGGAGAATATTTGTTATATTTGCAAAATAAAA
>XBR Xba repetitive element copy A, from human alpha-fetoprotein gene
AATTGATAGGTCACGTTCTCACTCTATTTGCCTTTAAGGGAAGAAAGCAATCAAGTTAATATGTTTTCCTTCATTGTATAGTATGTAACTACGGACACTATTAGAGGAGGGATTTGTGTAGCACTTAGGACATTATACTTGATAATTTCCAAGGGTCTTTCTAGATTTAAAAGTCTGATTCTAACGTAGTAATAAAAATAAAGGCCCAATTTTCTCTTTAATATTGCCTGAAGATATTACTCTATTATTGCATTAAAATTAAACATTCACACATTGTTTGCACTGCTAAATAAAATTATGTAA
>MARINER1 Human mariner
TTAGGTCGGTRCAAAAGTAATTRCGGTTTTTGCAYTGTTGGAATTTGYCATTTGATATTGGAATACATTCTTAAATAAATGTGGTTATGTTATACATCATTTTAATGGGCATTTCTCGCTTTACGTTTTTTTGCTAATGACTTATTACTTGCTGTTTATTTKRTGTTTATTTTAGACTATGNAAATGATGTTAGACAAAAAGCARATTCGAGCGATTTTCTTATTCAAGKTCAAAMTGRRTCGTAAAGCGGCGGAGACAACTCGCAACATCAGCAACGCATTTGGCCCAGGAACTGCTAATAAACATACAGTGCAGTGGTGGTTCAAGAAGTTTTNCAAAGGAGACGAGAGCCTTGAAGATGAGGAGTGTAATGACGGGCCATCAGAAGTTGACAACGACCAGTTGAGAGCAATCATCGAARYCGATCCTCTTACAACTANACGAGAAGTTGCTGAAGAACTCGACGTTGACCATTCTACGGTCGTTCGGCATTTGAAGCAAATTGGRAAGNAAAAACTCGATAAGTGGGTGCCTCATAAAGTGAGCAAAACTTTTTNAAATTGTCATTTTAAAGTGTCATCTCTTATTCTATGCAATAACAACGAACCATTTCTTGATCAGATTGTGACGTAGAACGAAAAGTGGATTTTATACGACAACCGGCGACGACCAGCTCAGTGGTTGGACCGAAAGAAGCTCCAAAGCACTTCCCAAAGCCAAACTTGCACCAAAAAAGTCGCGGTCGCGGTCTGGTGGTCTGCTGCCAGTGTGATCCACCACAGCTTTCTGAATCCTGGCAAAACCATTACATCTGAGAAGTATCTTCAGCAAATTGATGAGATGCACCAAAAACTGCAATGCCTGCACCTGGCATTGGTCAACAGAAAGGGCCCAATTCTTCTCCACGACAACGCCCGACCGCACGTYGCACAACCAACGCTTCAAAAGTTGAATAAATTGGGCTACGAACTTTTGCCTCATCCGCCATATTCACCTGACCTCTCGCCAACAAACTACCACTTCTTCAAGCATCTCGTCAACTTTTTGCAGGGAAAACGCTTCCACAACCAGCAGGATGCAGAAAATGCTTTCCAAGAGTTCGTCGAATCCCAAAGCACGGATTTTTATGCTACAGGAATAAACAAACTTATTTCTCGTTGGCAAAAATGTGTTGATTGTAATGGTTCCTATTTTGATTAATAAAGATGTGYTTGAGCCTAGTTATGATTATGATTTAATGGCCAAAACCACAATTACTTTTGCACCAACCTAA
>Made1 Human mariner derived element 1 - a consensus
TTAGGTTGGTGCAAAAGTAATTGCGGTTTTTGCCATTACTTTYAATGGCAAAAACCGCAATTACTTTTGCACCAACCTAA
>Tigger1 Autonomous DNA transposon
CAGGCATACCTCGTTTTATTGCGCTTCGCTTTATTGCGCTTCGCAGATACTGCGTTTTTTACAAATTGAAGGTTTGTGGCAACCCTGCGTTGAGCAAGTCTGTCGGCGCCATTTTTCCAACAGCATGTGCTCACTTCGTGTCTCTGTGTCACATTTTGGTAATTCTCGCAATATTTCAAACTTTTTCATTATTATTATATCTGTTATGGTGATCTGTGATCAGTGATCTTTGATGTTACTATTGTAATTGTTTTGGGGTGCCACGAACCGCACCCATATAAGACGGCGAACTTAATCGATAAATGTTGTGTGTGTTCTGACTGCTCCACCGACCGGCCGTTCCCCCGTCTCTCTCCCTCTCYTCGGGCCTCCCTATTCCCTGAGACACAACAATATTGAAATTAGGCCAATTAATAACCCTACAATGGCCTCTAAGTGTTCAAGTGAAAGGAAGAGTMRCACATCTCTCACTTTAAATCAAAAGCTAGAAATGATTAAGCTTAGTGAGGAAGGCATGTCAAAAGCCGAGATAGGCCAAAAGCTAGGCCTCTTGCGCCAAACAGTTAGCCAAGTTGTGAATGCAAAGGAAAAGTTCTTGAAGGAAATTAAAAGTGCTACTCCAGTGAACACACGAATGATAAGAAAGYAAAACAGCCTTATTGCTGATATGGAGAAAGTTTTAGTGGTCTGGATAGAAGATCAAACCAGCCACAAYATTCCCTTAAGCCAAAGCCTAATCCAGAGCAAGGCCCTAACTCTCTTCAATTCTATGAAGGCTGAGAGAGGTGAGGAAGCTGCAGAAGAAAAGTTTGAAGCTAGCAGAGGTTGGTTCATGAGGTTTAAGGAAAGAAGCCATCTCCATAACATAAAAGTGCAAGGTGAAGCAGCAAGTGCTGATGTAGAAGCTGCAGCAAGTTATCCAGAAGATCTAGCTAAGATCAYTGATGAAGGTGGCTACACTAAACAACAGATTTTCARTGTAGATGAAACAGCCTTCTATTGGAAGAAGATGCCATCTAGGACTTTCATAGCTAGAGAGGAGAAGTCAATGCCTGGCTTCAAAGCTTCAAAGGACAGGCTGACTCTCTTGTTAGGGGCTAATGCAGCTGGTGACTTTAAGTTGAAGCCAATGCTCATTTACCATTCTGAAAATCCTAGAGCCCTTAAGAATTATGCTAAATCTACTCTGCCTGTGCTCTATAAATGGAACAACAAAGCCTGGATGACAGCACATCTGTTTACAGCATGGTTTACTGAATATTTTAAGCCCACTGTTGAGACCTACTGCTCAGAAAAAAAGATTCCTTTCAAAATATTACTGCTCATTGACAACGCACCTGGTCACCCAAGAGCTCTGATGGAGATGTACAAGGAGATTAATGTTGTTTTCATGCCTGCTAACACAACATCCATTCTGCAGCCCATGGATCAAGGAGTAATTTCGACTTTCAAGTCTTATTATTTAAGAAATACATTTTATAAGGCTATAGCTGCCATAGATAGTGATTCCTCTGATGGATCTGGGCAAAGTAAATTGAAAACCTTCTGGAAAGGATTCACCATTCTAGATGCCATTAAGAACATTCGTGATTCATGGGAGGAGGTCAAAATATCAACATTAACAGGAGTTTGGAAGAAGTTGATTCCAACCCTCATGGATGACTTTGAGGGGTTYAAGACTTCAGTGGAGGAAGTAACTGCAGATGTGGTGGAAATAGCAAGAGAACTAGAATTAGAAGTGGAGCCTGAAGATGTGACTGAATTGCTGCAATCTCATGATAAAACTTGAACGGATGAGGAGTTGCTTCTTATGGATGAGCAAAGAAAGTGGTTTCTTGAGATGGAATCTACTCCTGGTGAAGATGCTGTGAACATTGTTGAAATGACAACAAAGGATTTAGAATATTACATAAACTTAGTTGATAAAGCAGCGGCAGGGTTTGAGAGGATTGACTCCAATTTTGAAAGAAGTTCTACTGTGGGTAAAATGCTGTCAAACAGCATCACATGCTACAGAGAAATCTTTCATGAAAGGAAGAGTCAATTGATGCGGCAAACTTCATTGTTGTCTTATTTTAAGAAATTGCCACAGCCACCCCAACCTTCAGCAACCACCACCCTGATCAGTCAGCAGCCATCAACATCAAGGCAAGACCCTCCACCAGCAAAAAGATTACGACTCGCTGAAGGCTCAGATGATCGTTAGCATTTTTTAGCAATAAAGTATTTTTAAATTAAGGTATGTACATTGTTTTTTAGACATAATGCTATTGCACACTTAATAGACTACAGTATAGCGTAAACATAACTTTTATATGCACTGGGAAACCAAAAAATTCGTGTGACTCGCTTTATTGCGATATTCGCTTTATTGCGGTGGTCTGGAACCGAACCCGCAATATCTCCGAGGTATGCCTG
>Tigger2 Autonomous DNA transposon
CAGTTGACCCTTGAACAACACGGGTTTGAACTGCGCGGGTCCACTTATACGTGRATTTTTTYCAATAAATATATTGGAAAAAWTTYTGGAGATTTGCAACAATTTGAAAAAACTCGCAGACGAACCGCGTAGCCTAGAAATATTGAAAAAATTAAGAAAAAGGTATGTCATGAATGTATAAAATATATGTAGATACTAGTCTATTTTATCATTTACTACCATAAAATAYACACAAANCTATTATAAAAAGTTAAAATTTATCAAAACTTAYAYAYAYACTTACAGACTGTACGTGGTACCATTCGAAGTNGAGAGAAATATAAACAAACNTAAAGATGCAGTATTAAATCACAACTGCGTAAAATTAACTGTAGTACATACTATACTACCGTAATAATTTTGTAGCCACCTCCTGTTGCTATTGCAGCGAGCTCAAGTGTTGTGAGTACCTGCTTAAAACGCTSKGTGATGCTAATCATCTCCGCGCGAGCAGTTYATCTCTCCAGTAAATTGCGTATTGCAGTAAAAAGTGATCTCTCACGGTTCTCGCGTATTTTTCATTGTGTTTARTGCAATATTGTAAACCTTGAATAACACCATGGGACCCATACGAAGTGCCACTAGTGATGCTGGAAGTGCTCCCAAGAAGCAGAGAAAAGTCATGACATTACAAGAAAAAGTTGAATTGCTTGATATGTACCATAGATTGAGGTCTGCAGCTGGGGTTGCCTGCCATTTCAAGAYAGATGAATCCGGCGTAAGGACCGTTGTMAAAAAAGAAAAGGAAATTCGTGAARACCGTCGCTGCAGTTATGCCCAGCAGGCACAAAAACTTGTNACTTTTTGCGAAATACCTTTTTATGTTGTATTGAAAATGCAGCTTTTNTGTGGGTGCAGGATTGCTATAAGAAAGGMATACCTANAGACTCTAATATGATTAGAGAAAAAGCGAAGTCATTATGTGANNACTTAAAGCAAAARRAAGATGAMRGATCTAAAGCTGGANAATTTAATGCCAGCAAAKGATGGTTTGACAATTTTAGAAAGARGTWTGGCTTAAAAAATKTCAAGAKAACAGGAGAAGCASYTTCTGCTGACCAAGAGACAGCAGACGAGTTNCCAGATGCCATTAACAAAATCATTGAGGAGAAAGGATATCTGCCTGAACAGGTTTTTAATGCAGATGARAGTGCCCTATTCTGGGGGGAAAAAATGCCACAAAGRACATTTATTAGTAAGNAAGAGAAGCGAGCACCAGGATTTAAGGCARGAAGGGATAGGCTAACTCTACTGTTTTGTGCAAATGCAGTTAGGTTTATGATCAGGACTGCCCTTATCTATAAAGCTGCTAACCCCCGAGCCTTGAAGGGAAAAGATAAACGCCAGCTGCCAGTCTTTTGGTTGTACAACAAGAAGGCCTGGACAACGAGAACCCTTTTTCTGGATTGGTTCCATTKATGCTTTGTCCCTGAWGTCAGGAAGTACCTTGCCAGTAAGRGACTGCCTTTTAAAGTTCTTTTGATATTGGACAATGCCCYTGGCCACCCAGAACCCCATGAGTTCAACACCGAAGGTGTCGAAGTGGTCTACTTGCCCCCAAACACAACGTCTCTAATTCAGCCTCTAGATCAGGGGGTCATAAGGACCTTTAAGGCTCATTACACACGGTACTCTATGGAAAGGATTGTCAACGCTATGGAAGAGAACCCCGATAGARAGAACATCATGAAAGTCTGGAAGGATTACACCATTGAAGATGCCATTGTTRTTATAGAAAAAGCCGTGAAAGCCATCAAGCCCAAAACAGTAAATTCCTGCTGGAGAAAACTGTGTCCAGATGTTGTACATGACTTCACAGGATTTACGACAGAGCCAATCAAGGAAATCATGAAAGAGATTGTGGATATGGCAAAAAAGTTGGGGGGTAAAGGGTTTCAAGATGCGAATCTTGGAGAAATTCAAGAGCWAATAGACACCACACCAGAGGAATTAACAGAAGACGACTTGATGGAGATGAGTGCTTCCGAACCAGTGCCAGACGATGAGGAAGAAGACATNGAAGAAGCAGTGCCAGAAAACAAATTGACATTAGACAATCTRGGCAGAAGGGTTCCAATTATTCAAGACTGCTTTTGACTTCTTTTACAACATGGACCCTTCTATGATACGGGCACTGAAACTAAAGCAAACAGTGGAAGAAGGATTGGTAYTATACAGAAACATTTTTAGAGAAATGAAAAGGCAAAAAYRTCAGACAGAAATTACGATGTATTTCCGTAAAGTTACACCGAGTGTGCCTGCCTCTCCTGCCTCCCCTTCCACCTCCTCCACCTCTTCCACCTCTGCCACCCTGAGACAGCAAGACCAACCCCTCCTCCTCCTCAGCCTWCTCAATGTGAAGACGACGAGGATGAAGACCTTTATGATGATCCACTTCCACTTAATGAATAGTAAATATATTTTCTCTTCCTTATGATTTTCTTAATAACATTTTCTTTTCTCTAGCTTACTTTATTGTAAGAATACGGTATATAATACATATAACATACAAAATATGTGTTAATCGACTGTTTATGTTATCGGTAAGGCTTCCAGTCAACAGTAGGCTATTAGTAGTTAAGTTTTKGGGGAGTCAAAAGTTATACGTGGATTTTTNACTGCGCGGGGGGTCAGCGCCCCTAACCCCCGCGTTGTTCAAGGGTCAACTG
>PTR5 Human PTR5 mRNA for repetitive sequence
GAATTCCGAAGCTTTGTTCTTTAGCTCTTTGCAATAAATCTTGCTGCTGCTCACTCTTTGGGTCCACACTGCCTTTACGAGCTGTAACACTCACCGCGAAGGTCTGCAGCTTCACTCCTGAAGCCAGTGAGACCACGAACCCACCAGGAGGAACAAACAACTCCAGATGTGCTGCCTTAAGAGCTGTAACACTCACCGCGAAGGTCTGCAGCTTCAGTCCTAAGCCAGCAAGACCACGAACCCACCAGAAGGAAGAAACTCTGAACACATCCAAACATCAGAAGGAACAAACTCTGGACATGCCGCCTTTAAGAACTGTGACACTCACCACGAGGGTCCGTGGCTTCATTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCCAGACACATTTTGGCAACCACAAAGGGACTATCACCTATTGCCAAGCGGTGAGACTATCGCCAAGTGGTGAGACCATCGTCTATCGCTGAGCAGCAAAACAATCGCCTATCGCCAAGCAAATCGAAGCCATCAAGCTACAGATGGTCTTACAAATGGAACCCCAAATGAGTTCAACTAACAACTTCTACCGAGGACCCCTGGACCGACCCGCTGGCACTTCCACTGGCCTAGAGAGTTCCCCCTTGAGACACTACAACTGCAGGGCCCCTTCTTCACTTCTATCCAGCAGGAAGTAGCTAGAGCAGTCATCGGCCAAATTCCCAACAGCAGTTGGGGTGTCCTGTTTAGAGGGGGGATTGAGAGGTGGCAGTGTGCTGGCAGCCCTCGCAGCCCTCGCTCACTCTTGGCTCCTCCTCGGCCTTGGCGCCCACTCTGGCCATGCTTAAGGAGCCCTTCAGCCTGCCACTGCACTGTGGGAACACTGGCCAAGGCCAGAGCCAGCTCACTCAGCTTGTGGGGAAGTGTGGAGGGAGAGGCGCAGGCGGGAACTGGGGCTCGATGCGGCGCTTGCGGGCCAGCGTGAGTTCCGGTGGTTGGTGGCTTGGCGGGCCCCAGACTCGGAGCGGCTGGCCTGCCCTGCTGGCCCCAGGCAGTGAGGGGCTTAGCACCCAGGCCAGCAGCTGTGGATGGTGCGCTGAGTCTCCCAGCAGTGCTGGCCCACCCCACCAGCACTGCACTCGATTTCTCGCCAGGCCTTAGCTGCCTCCCCGCAGGCAGGCCTTGGGACCTGCAGCCCACCATGCCTGAGTCTCCCCTGCTGCCGCCGTGGGCTCCTGCGTGGCCCAAGCCTCCCCGACGAGCACTGCCCCCTGCTCCCCGGTGCCTGGTCCCATCGACCCCAAGGGCTGAGGAGTGCAGGTGCATGCTGCGGGACTGGCAGGCAGCTCCACCTGCGGCCCCATGCAGGAAGCCAGCTGGGCTCCTGAGTCTGGTGGGGACTTGGAGAATTTTTATGTCTAGCTAAGGGATTGTAAATACACCAATCAGCACTCTGTATCTAGCTCAAGGATTGTAAATACACCAATCAGCACCCTGTGTCTAGCTCAGGGTTTGTCAATGCACCAATCGGCACTCTGTATCTAGTTAATCTGGTGGGGAGTTGGAGAATCTTTATGTCTAGCTAAGGGATTGTAAATACACCAATCAGCACTCTGTATCTAGCTCAAGGTTTGTAAACACACCAATCAGAACCCTGTGTCTAGCTCAGGGTTTGTGAATGCACCAATCAGCACTCTGTATCTAGTTAATCTGGTGGGGACTTGGAGAATCTTTATGTCTAGCTAAGGGATTGTGAATGCACCAATCGGCACTCTGTATCTAGCTCAAGGTTGTAAATGGACCAATCAGCACTCTATGTCTAGCTCAGTGTTTGTAAATACACCAATCGACACTCTATCTAGCTAATCTAGTGGGGACGTGGAGAACTTTTGTGTCTAACTCAGGGATTGTAAATGCACCAATCAGAACCCTGTCAAAATGGACCAATAGCTCTCTGTAAAACAGACTGACTTTCTGTAAAATGGACCAATCAGCAGGATGTGGGTGGGGCCAGATAAGAGAAGAAAAGCAGGCTGCCTGAGCCAGCAGTGGCAACCCGCTTGGGTCCCCTTCCACACTGTGGAAGCTTTGTTCTTTCGCTCTTTGCAATAAATCTTGCTGCTGCTCACTCTTTGGGTCCACACTGCCTTTATGAGCTGTAACACTCACCGCGAAGGTCTGCAGCTTCATCTGAAGCAGCGAGACACGAACCCACCAGGAGGAACAAACAACTCCGATGCGCTGCCTTAAGAGCTGTAACACCGCGAGGTCTCGAGCTTCACTCCTGAGCCAGCAAGACCACAAACCCACCAGAAGGAAGAAACTCAGGAAAACAGCCGAACATCAGAAGGAATAAACTCTGGACACACCACCTTTAAGAACTGTGACACTCGCTGCGAGCGTCTGTGGCTTCATTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCTGGAC
>PAB Human pseudoautosomal boundary-like sequence.
CCTTACCAGCCCCCTACTGTGGCAGGCCAGGTCCCACTAACACAGGCCTCCATAACAACTGTTTCAGCTCTGACTGAGTGGTTAAGTTAAATACTAAAAGCCGAGAGAGCCAGTCCCCTTATACAGAGGCTGGAATGTAACAAAAGCCCACCAAGAGTTTTGCCTAGGCCTTTCCTGGGCCTTGAAGCATGACAAAATAACAAAAGAATTCTTAACAGAATCTATTTAGGATTAAACAAGTTTTACTGGGGGTTCTGAAGAAACTCCCCAGTCCTCCACAAACAAGTTTACTGGGGTCTGAAAGAACTCCCCAAACCTCCATGATTTAGCAGGAGACAAGATAAGGGTAATCACCCCAGCACCTGGACCCAGCTAGATTTAGTCAATTTACTGAGGCTACAAAGGAAGGTCTTCAGGACTCAGACCTCAGTTATAGATTAGAAGAAGTTAATCACTTATGTCTTTAGATGATTGCACACTTACACATAGACATATAGCTTAGAAGGTGTATAAGCTCTGGAAAACTTTGTAATTTTGAGTTGGTCTGGTGATATTTTCCAGGCCTTCTCCCTATACCCGGTTACAGAAATAAAAACTTTCTTCCTCCCCAGTTCATCTGCATCTTGTTAATGGGCTGCCAGAAATAGCAGCCCAACCCTCAGTTAGGTCTGGGAACACTACCCCCCAACACACACACACACAC
>TARE Transposable element
GAATTCCGCGCCCGTCCCGTCGCCGCCGCCGCCGCCGCAGACCCCTCGGTCTTGCTATGTCGAGCTCACCCGTGAAGCGTCAGAGGATGGAGTCCGCGCTGGACCAGCTCAAGCAGTTCACCACCGTGGTGGCCGACACGGGCGACTTCCACGCCATCGACGAGTACAAGCCCCAGGATGCTACCACCAACCCGTCCCTGATCCTGGCCGCAGCACAGATGCCCGCTTACCAGGAGCTGGTGGAGGAGGCGATTGCCTATGGCCGGAAGCTGGGCGGGTCACAAGAGGACCAGATTAAAAATGCTATTGATAAACTTTTTGTGTTGTTTGGAGCAGAAATACTAAAGAAGATTCCGGGCCGAGTATCCACAGAAGTAGACGCAAGGCTCTCCTTTGATAAAGATGCGATGGTGGCCAGAGCCAGGCGGCTCATCGAGCTCTACAAGGAAGCTGGGATCAGCAAGGACCGA
>A Primate simple repeat pattern
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
>C Primate simple repeat pattern
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>AC Primate simple repeat pattern
ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA
>AT Primate simple repeat pattern
ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA
>AG Primate simple repeat pattern
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
>CG Primate simple repeat pattern
CGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGC
>GCC Primate simple repeat pattern
GCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCC
>TAA Primate simple repeat pattern
TAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAA
>CAA Primate simple repeat pattern
CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA
>GCA Primate simple repeat pattern
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
>CTA Primate simple repeat pattern
CTACTACTACTACTACTACTACTACTACTACTACTACTACTACTACTACTACTACTACTACTACTACTA
>GGA Primate simple repeat pattern
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
>GAA Primate simple repeat pattern
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA
>TCA Primate simple repeat pattern
TCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCA
>CCA Primate simple repeat pattern
CCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCA
>TAGA Primate simple repeat pattern
TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT
>CAAA Primate simple repeat pattern
CAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAAC
>TAAA Primate simple repeat pattern
TAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT
>GAAA Primate simple repeat pattern
GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG
>TCCA Primate simple repeat pattern
TCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCAT
>CGAA Primate simple repeat pattern
CGAACGAACGAACGAACGAACGAACGAACGAACGAACGAACGAACGAACGAACGAACGAACGAACGAAC
>TGAA Primate simple repeat pattern
TGAATGAATGAATGAATGAATGAATGAATGAATGAATGAATGAATGAATGAATGAATGAATGAATGAAT
>CGGA Primate simple repeat pattern
CGGACGGACGGACGGACGGACGGACGGACGGACGGACGGACGGACGGACGGACGGACGGACGGACGGAC
>GGAA Primate simple repeat pattern
GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG
>TACA Primate simple repeat pattern
TACATACATACATACATACATACATACATACATACATACATACATACATACATACATACATACATACAT
>TCAA Primate simple repeat pattern
TCAATCAATCAATCAATCAATCAATCAATCAATCAATCAATCAATCAATCAATCAATCAATCAATCAAT
>GACA Primate simple repeat pattern
GACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAG
>CCTA Primate simple repeat pattern
CCTACCTACCTACCTACCTACCTACCTACCTACCTACCTACCTACCTACCTACCTACCTACCTACCTAC
>GCCC Primate simple repeat pattern
GCCCGCCCGCCCGCCCGCCCGCCCGCCCGCCCGCCCGCCCGCCCGCCCGCCCGCCCGCCCGCCCGCCCG
>TTAA Primate simple repeat pattern
TTAATTAATTAATTAATTAATTAATTAATTAATTAATTAATTAATTAATTAATTAATTAATTAATTAAT
>GGGA Primate simple repeat pattern
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG
>GGCA Primate simple repeat pattern
GGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAG
>GCCA Primate simple repeat pattern
GCCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAG
>CAAAA Primate simple repeat pattern
CAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAA
>TGGAA Primate simple repeat pattern
TGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGA
>TAAAA Primate simple repeat pattern
TAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAA
>GCCCA Primate simple repeat pattern
GCCCAGCCCAGCCCAGCCCAGCCCAGCCCAGCCCAGCCCAGCCCAGCCCAGCCCAGCCCAGCCCAGCCC
>GCTCA Primate simple repeat pattern
GCTCAGCTCAGCTCAGCTCAGCTCAGCTCAGCTCAGCTCAGCTCAGCTCAGCTCAGCTCAGCTCAGCTC
>GAAAA Primate simple repeat pattern
GAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAA
>TACAA Primate simple repeat pattern
TACAATACAATACAATACAATACAATACAATACAATACAATACAATACAATACAATACAATACAATACA
>CTCCA Primate simple repeat pattern
CTCCACTCCACTCCACTCCACTCCACTCCACTCCACTCCACTCCACTCCACTCCACTCCACTCCACTCC
>TCTAA Primate simple repeat pattern
TCTAATCTAATCTAATCTAATCTAATCTAATCTAATCTAATCTAATCTAATCTAATCTAATCTAATCTA
>TAGAA Primate simple repeat pattern
TAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGA
>GGAGA Primate simple repeat pattern
GGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAG
>TTAAA Primate simple repeat pattern
TTAAATTAAATTAAATTAAATTAAATTAAATTAAATTAAATTAAATTAAATTAAATTAAATTAAATTAA
>GCCCC Primate simple repeat pattern
GCCCCGCCCCGCCCCGCCCCGCCCCGCCCCGCCCCGCCCCGCCCCGCCCCGCCCCGCCCCGCCCCGCCC
>GCGCA Primate simple repeat pattern
GCGCAGCGCAGCGCAGCGCAGCGCAGCGCAGCGCAGCGCAGCGCAGCGCAGCGCAGCGCAGCGCAGCGC
>GGGGA Primate simple repeat pattern
GGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGG
>GGCCC Primate simple repeat pattern
GGCCCGGCCCGGCCCGGCCCGGCCCGGCCCGGCCCGGCCCGGCCCGGCCCGGCCCGGCCCGGCCCGGCC
>TCCCA Primate simple repeat pattern
TCCCATCCCATCCCATCCCATCCCATCCCATCCCATCCCATCCCATCCCATCCCATCCCATCCCATCCC
>CCCCA Primate simple repeat pattern
CCCCACCCCACCCCACCCCACCCCACCCCACCCCACCCCACCCCACCCCACCCCACCCCACCCCACCCC
>CCCTAA Primate simple repeat pattern
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCC
>CCCGAA Primate simple repeat pattern
CCCGAACCCGAACCCGAACCCGAACCCGAACCCGAACCCGAACCCGAACCCGAACCCGAACCCGAACCC
>TATACA Primate simple repeat pattern
TATACATATACATATACATATACATATACATATACATATACATATACATATACATATACATATACATAT
>TCACCA Primate simple repeat pattern
TCACCATCACCATCACCATCACCATCACCATCACCATCACCATCACCATCACCATCACCATCACCATCA
>CCCCAA Primate simple repeat pattern
CCCCAACCCCAACCCCAACCCCAACCCCAACCCCAACCCCAACCCCAACCCCAACCCCAACCCCAACCC
>CAAAAA Primate simple repeat pattern
CAAAAACAAAAACAAAAACAAAAACAAAAACAAAAACAAAAACAAAAACAAAAACAAAAACAAAAACAA
>CCCTCA Primate simple repeat pattern
CCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCC
>GCCCCC Primate simple repeat pattern
GCCCCCGCCCCCGCCCCCGCCCCCGCCCCCGCCCCCGCCCCCGCCCCCGCCCCCGCCCCCGCCCCCGCC
>GAAAAA Primate simple repeat pattern
GAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAA
>GGAGAA Primate simple repeat pattern
GGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGA
>CCCCCA Primate simple repeat pattern
CCCCCACCCCCACCCCCACCCCCACCCCCACCCCCACCCCCACCCCCACCCCCACCCCCACCCCCACCC
>TAAAAA Primate simple repeat pattern
TAAAAATAAAAATAAAAATAAAAATAAAAATAAAAATAAAAATAAAAATAAAAATAAAAATAAAAATAA
>GGGAGA Primate simple repeat pattern
GGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGG
>GCCCCA Primate simple repeat pattern
GCCCCAGCCCCAGCCCCAGCCCCAGCCCCAGCCCCAGCCCCAGCCCCAGCCCCAGCCCCAGCCCCAGCC
>GGGGGA Primate simple repeat pattern
GGGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGG
>GAGACA Primate simple repeat pattern
GAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAG
>A Primate simple repeat pattern
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
>C Primate simple repeat pattern
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
>AC Primate simple repeat pattern
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
>AT Primate simple repeat pattern
TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT
>AG Primate simple repeat pattern
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
>CG Primate simple repeat pattern
GCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCGCG
>GCC Primate simple repeat pattern
GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
>TAA Primate simple repeat pattern
TTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTA
>CAA Primate simple repeat pattern
TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG
>GCA Primate simple repeat pattern
TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC
>CTA Primate simple repeat pattern
TAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAG
>GGA Primate simple repeat pattern
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC
>GAA Primate simple repeat pattern
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
>TCA Primate simple repeat pattern
TGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGA
>CCA Primate simple repeat pattern
TGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGG
>TAGA Primate simple repeat pattern
ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTA
>CAAA Primate simple repeat pattern
GTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG
>TAAA Primate simple repeat pattern
ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA
>GAAA Primate simple repeat pattern
CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC
>TCCA Primate simple repeat pattern
ATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGA
>CGAA Primate simple repeat pattern
GTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCG
>TGAA Primate simple repeat pattern
ATTCATTCATTCATTCATTCATTCATTCATTCATTCATTCATTCATTCATTCATTCATTCATTCATTCA
>CGGA Primate simple repeat pattern
GTCCGTCCGTCCGTCCGTCCGTCCGTCCGTCCGTCCGTCCGTCCGTCCGTCCGTCCGTCCGTCCGTCCG
>GGAA Primate simple repeat pattern
CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC
>TACA Primate simple repeat pattern
ATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTA
>TCAA Primate simple repeat pattern
ATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGA
>GACA Primate simple repeat pattern
CTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTC
>CCTA Primate simple repeat pattern
GTAGGTAGGTAGGTAGGTAGGTAGGTAGGTAGGTAGGTAGGTAGGTAGGTAGGTAGGTAGGTAGGTAGG
>GCCC Primate simple repeat pattern
CGGGCGGGCGGGCGGGCGGGCGGGCGGGCGGGCGGGCGGGCGGGCGGGCGGGCGGGCGGGCGGGCGGGC
>TTAA Primate simple repeat pattern
ATTAATTAATTAATTAATTAATTAATTAATTAATTAATTAATTAATTAATTAATTAATTAATTAATTAA
>GGGA Primate simple repeat pattern
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
>GGCA Primate simple repeat pattern
CTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCC
>GCCA Primate simple repeat pattern
CTGGCTGGCTGGCTGGCTGGCTGGCTGGCTGGCTGGCTGGCTGGCTGGCTGGCTGGCTGGCTGGCTGGC
>CAAAA Primate simple repeat pattern
TTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG
>TGGAA Primate simple repeat pattern
TCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCA
>TAAAA Primate simple repeat pattern
TTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTA
>GCCCA Primate simple repeat pattern
GGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGGGC
>GCTCA Primate simple repeat pattern
GAGCTGAGCTGAGCTGAGCTGAGCTGAGCTGAGCTGAGCTGAGCTGAGCTGAGCTGAGCTGAGCTGAGC
>GAAAA Primate simple repeat pattern
TTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTC
>TACAA Primate simple repeat pattern
TGTATTGTATTGTATTGTATTGTATTGTATTGTATTGTATTGTATTGTATTGTATTGTATTGTATTGTA
>CTCCA Primate simple repeat pattern
GGAGTGGAGTGGAGTGGAGTGGAGTGGAGTGGAGTGGAGTGGAGTGGAGTGGAGTGGAGTGGAGTGGAG
>TCTAA Primate simple repeat pattern
TAGATTAGATTAGATTAGATTAGATTAGATTAGATTAGATTAGATTAGATTAGATTAGATTAGATTAGA
>TAGAA Primate simple repeat pattern
TCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTA
>GGAGA Primate simple repeat pattern
CTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCC
>TTAAA Primate simple repeat pattern
TTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAA
>GCCCC Primate simple repeat pattern
GGGCGGGGCGGGGCGGGGCGGGGCGGGGCGGGGCGGGGCGGGGCGGGGCGGGGCGGGGCGGGGCGGGGC
>GCGCA Primate simple repeat pattern
GCGCTGCGCTGCGCTGCGCTGCGCTGCGCTGCGCTGCGCTGCGCTGCGCTGCGCTGCGCTGCGCTGCGC
>GGGGA Primate simple repeat pattern
CCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCC
>GGCCC Primate simple repeat pattern
GGCCGGGCCGGGCCGGGCCGGGCCGGGCCGGGCCGGGCCGGGCCGGGCCGGGCCGGGCCGGGCCGGGCC
>TCCCA Primate simple repeat pattern
GGGATGGGATGGGATGGGATGGGATGGGATGGGATGGGATGGGATGGGATGGGATGGGATGGGATGGGA
>CCCCA Primate simple repeat pattern
GGGGTGGGGTGGGGTGGGGTGGGGTGGGGTGGGGTGGGGTGGGGTGGGGTGGGGTGGGGTGGGGTGGGG
>CCCTAA Primate simple repeat pattern
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGG
>CCCGAA Primate simple repeat pattern
GGGTTCGGGTTCGGGTTCGGGTTCGGGTTCGGGTTCGGGTTCGGGTTCGGGTTCGGGTTCGGGTTCGGG
>TATACA Primate simple repeat pattern
ATATGTATATGTATATGTATATGTATATGTATATGTATATGTATATGTATATGTATATGTATATGTATA
>TCACCA Primate simple repeat pattern
TGATGGTGATGGTGATGGTGATGGTGATGGTGATGGTGATGGTGATGGTGATGGTGATGGTGATGGTGA
>CCCCAA Primate simple repeat pattern
GGGTTGGGGTTGGGGTTGGGGTTGGGGTTGGGGTTGGGGTTGGGGTTGGGGTTGGGGTTGGGGTTGGGG
>CAAAAA Primate simple repeat pattern
TTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTG
>CCCTCA Primate simple repeat pattern
GGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGG
>GCCCCC Primate simple repeat pattern
GGCGGGGGCGGGGGCGGGGGCGGGGGCGGGGGCGGGGGCGGGGGCGGGGGCGGGGGCGGGGGCGGGGGC
>GAAAAA Primate simple repeat pattern
TTCTTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTTTTTC
>GGAGAA Primate simple repeat pattern
TCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCC
>CCCCCA Primate simple repeat pattern
GGGTGGGGGTGGGGGTGGGGGTGGGGGTGGGGGTGGGGGTGGGGGTGGGGGTGGGGGTGGGGGTGGGGG
>TAAAAA Primate simple repeat pattern
TTATTTTTATTTTTATTTTTATTTTTATTTTTATTTTTATTTTTATTTTTATTTTTATTTTTATTTTTA
>GGGAGA Primate simple repeat pattern
CCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCC
>GCCCCA Primate simple repeat pattern
GGCTGGGGCTGGGGCTGGGGCTGGGGCTGGGGCTGGGGCTGGGGCTGGGGCTGGGGCTGGGGCTGGGGC
>GGGGGA Primate simple repeat pattern
CCCTCCCCCTCCCCCTCCCCCTCCCCCTCCCCCTCCCCCTCCCCCTCCCCCTCCCCCTCCCCCTCCCCC
>GAGACA Primate simple repeat pattern
CTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTC
