libpappsomspp
Library for mass spectrometry
Loading...
Searching...
No Matches
scan.h
Go to the documentation of this file.
1
/**
2
* \file pappsomspp/core/processing/cbor/mzcbor/scan.h
3
* \date 03/02/2026
4
* \author Olivier Langella
5
* \brief PSI scan object for mzML/mzCBOR
6
*/
7
8
/*******************************************************************************
9
* Copyright (c) 2025 Olivier Langella <Olivier.Langella@universite-paris-saclay.fr>.
10
*
11
* This file is part of PAPPSOms-tools.
12
*
13
* PAPPSOms-tools is free software: you can redistribute it and/or modify
14
* it under the terms of the GNU General Public License as published by
15
* the Free Software Foundation, either version 3 of the License, or
16
* (at your option) any later version.
17
*
18
* PAPPSOms-tools is distributed in the hope that it will be useful,
19
* but WITHOUT ANY WARRANTY; without even the implied warranty of
20
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
21
* GNU General Public License for more details.
22
*
23
* You should have received a copy of the GNU General Public License
24
* along with PAPPSOms-tools. If not, see <http://www.gnu.org/licenses/>.
25
*
26
******************************************************************************/
27
28
29
#pragma once
30
#include <QString>
31
#include "
pappsomspp/core/processing/cbor/cborstreamreader.h
"
32
#include "
pappsomspp/core/processing/cbor/mzcbor/cvparammap.h
"
33
34
namespace
pappso
35
{
36
namespace
cbor
37
{
38
namespace
mzcbor
39
{
40
41
/**
42
* @todo write docs
43
*/
44
struct
PMSPP_LIB_DECL
Scan
45
{
46
void
fromCbor
(
CborStreamReader
&reader);
47
48
/** @brief write the structure to a JSON object
49
* @result QJsonObject
50
*/
51
QJsonObject
toJsonObject
()
const
;
52
53
double
getRtInSeconds
()
const
;
54
55
CvParamMap
cvParamMap
;
56
};
57
}
// namespace mzcbor
58
}
// namespace cbor
59
}
// namespace pappso
cborstreamreader.h
pappso::cbor::CborStreamReader
simple override of the raw QCborStreamReader This adds convenient functions to put CBOR data into C++...
Definition
cborstreamreader.h:46
cvparammap.h
cvParam map
PMSPP_LIB_DECL
#define PMSPP_LIB_DECL
Definition
export-import-config.h:14
pappso::cbor::mzcbor
Definition
binarydataarray.h:41
pappso::cbor
Definition
cborstreamreader.cpp:35
pappso
tries to keep as much as possible monoisotopes, removing any possible C13 peaks and changes multichar...
Definition
aa.cpp:39
pappso::cbor::mzcbor::CvParamMap
Definition
cvparammap.h:46
pappso::cbor::mzcbor::Scan
Definition
scan.h:45
pappso::cbor::mzcbor::Scan::toJsonObject
QJsonObject toJsonObject() const
write the structure to a JSON object
Definition
scan.cpp:95
pappso::cbor::mzcbor::Scan::fromCbor
void fromCbor(CborStreamReader &reader)
Definition
scan.cpp:57
pappso::cbor::mzcbor::Scan::cvParamMap
CvParamMap cvParamMap
Definition
scan.h:55
pappso::cbor::mzcbor::Scan::getRtInSeconds
double getRtInSeconds() const
Definition
scan.cpp:34
pappsomspp
core
processing
cbor
mzcbor
scan.h
Generated on
for libpappsomspp by
1.15.0