##
##  Copyright 2004-2012, 2014 SRI International
##
##  Copyright 1997-2009 Torsten Rohlfing
##
##  This file is part of the Computational Morphometry Toolkit.
##
##  http://www.nitrc.org/projects/cmtk/
##
##  The Computational Morphometry Toolkit is free software: you can
##  redistribute it and/or modify it under the terms of the GNU General Public
##  License as published by the Free Software Foundation, either version 3 of
##  the License, or (at your option) any later version.
##
##  The Computational Morphometry Toolkit is distributed in the hope that it
##  will be useful, but WITHOUT ANY WARRANTY; without even the implied
##  warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
##  GNU General Public License for more details.
##
##  You should have received a copy of the GNU General Public License along
##  with the Computational Morphometry Toolkit.  If not, see
##  <http://www.gnu.org/licenses/>.
##
##  $Revision: 5224 $
##
##  $LastChangedDate: 2014-03-11 16:38:30 -0700 (Tue, 11 Mar 2014) $
##
##  $LastChangedBy: torstenrohlfing $
##

# Sources of non-templated classes.
SET(cmtkIO_SRCS
  cmtkAffineXformITKIO.cxx
  cmtkSplineWarpXformITKIO.cxx
  cmtkClassStreamAffineXform.cxx
  cmtkClassStreamParametricPlane.cxx
  cmtkClassStreamPolynomialXform.cxx
  cmtkClassStreamStudyList.cxx
  cmtkClassStreamWarpXform.cxx
  cmtkFileFormat.cxx
  cmtkGroupwiseRegistrationFunctionalIO.cxx
  cmtkImageFileDICOM.cxx
  cmtkImageOperationApplyMask.cxx
  cmtkImageOperationMatchIntensities.cxx
  cmtkImageStackDICOM.cxx
  cmtkLandmarkIO.cxx
  cmtkLandmarkListIO.cxx
  cmtkPhantomIO_MagphanEMR051.cxx
  cmtkSegmentationLabelIO.cxx
  cmtkSiemensCSAHeader.cxx
  cmtkStudy.cxx
  cmtkStudyList.cxx
  cmtkTypedStream.cxx
  cmtkTypedStreamInput.cxx
  cmtkTypedStreamOutput.cxx
  cmtkTypedStreamStudylist.cxx
  cmtkVolumeFromFile.cxx
  cmtkVolumeFromFileAnalyze.cxx
  cmtkVolumeFromFileBioRad.cxx
  cmtkVolumeFromFileMetaFile.cxx
  cmtkVolumeFromFileNRRD.cxx
  cmtkVolumeFromFileNifti.cxx
  cmtkVolumeFromFileVanderbilt.cxx
  cmtkVolumeFromSlices.cxx
  cmtkVolumeIO.cxx
  cmtkXformIO.cxx
  cmtkXformListIO.cxx
  cmtkXformIONifti.cxx
  cmtkXformIONrrd.cxx
  nifti1_io_math.c
)

IF(CMTK_USE_DCMTK)
  SET(cmtkIO_SRCS ${cmtkIO_SRCS} 
    cmtkDICOM.cxx
    cmtkVolumeFromStudy.cxx
    cmtkVolumeFromFileDICOM.cxx)
ENDIF(CMTK_USE_DCMTK)

IF(CMTK_USE_SQLITE)
  SET(cmtkIO_SRCS ${cmtkIO_SRCS} 
    cmtkSQLite.cxx)
ENDIF(CMTK_USE_SQLITE)

ADD_LIBRARY(cmtkIO ${cmtkIO_SRCS})

TARGET_LINK_LIBRARIES(cmtkIO cmtkBase cmtkSystem cmtkNumerics ${NRRD_LIBRARIES} ${CMTK_SQLITE_LIB} ${DCMTK_LIBRARIES} ${CMTK_ZLIB_LIB})

IF(CMTK_LIBRARY_PROPERTIES)
  SET_TARGET_PROPERTIES(cmtkIO PROPERTIES ${CMTK_LIBRARY_PROPERTIES})
ENDIF(CMTK_LIBRARY_PROPERTIES)

INSTALL(TARGETS cmtkIO
  RUNTIME DESTINATION ${CMTK_INSTALL_BIN_DIR} COMPONENT runtime
  LIBRARY DESTINATION ${CMTK_INSTALL_LIB_DIR} COMPONENT runtime
  ARCHIVE DESTINATION ${CMTK_INSTALL_LIB_DIR} COMPONENT libraries)

FILE(GLOB files_h "${CMAKE_CURRENT_SOURCE_DIR}/*.h")
FILE(GLOB files_txx "${CMAKE_CURRENT_SOURCE_DIR}/*.txx")
INSTALL(FILES ${files_h} ${files_txx} DESTINATION ${CMTK_INSTALL_INCLUDE_DIR}/IO COMPONENT headers)
