
<colors>
<<include etc/colors.conf>>
</colors>

<fonts>
<<include etc/fonts.conf>>
</fonts>

<<include ideogram.conf>>
<<include ticks.conf>>

# specify the karyotype file here; try also
#  data/2/karyotype.dog.txt
#  data/2/karyotype.rat.txt
#  data/2/karyotype.mouse.txt
#  data/2/karyotype.all.txt (human+dog+rat+mouse)
# but reduce frequency of ticks when increasing the 
# number of ideograms
karyotype = data/karyotype.human.txt

<image>
dir = /home/martink/www/htdocs/tmp
file  = circos-tutorial.png
# radius of inscribed circle in image
radius         = 1500p
background     = white
# by default angle=0 is at 3 o'clock position
angle_offset   = -90
#angle_orientation = counterclockwise
</image>

chromosomes_units           = 1000000

#chromosomes_display_default = yes

chromosomes = hs1;hs2;hs3

anglestep       = 0.5
minslicestep    = 10
beziersamples   = 40
debug           = no
warnings        = no
imagemap        = no

units_ok = bupr
units_nounit = n

