Build.PL
Changes
LICENSE
META.json
README.md
cpanfile
lib/App/Fasops.pm
lib/App/Fasops/Command/axt2fas.pm
lib/App/Fasops/Command/check.pm
lib/App/Fasops/Command/concat.pm
lib/App/Fasops/Command/covers.pm
lib/App/Fasops/Command/join.pm
lib/App/Fasops/Command/links.pm
lib/App/Fasops/Command/maf2fas.pm
lib/App/Fasops/Command/names.pm
lib/App/Fasops/Command/refine.pm
lib/App/Fasops/Command/replace.pm
lib/App/Fasops/Command/separate.pm
lib/App/Fasops/Command/slice.pm
lib/App/Fasops/Command/split.pm
lib/App/Fasops/Command/subset.pm
lib/App/Fasops/Command/xlsx.pm
lib/App/Fasops/Common.pm
minil.toml
script/fasops
t/01-basic.t
t/02-commands.t
t/03-names.t
t/04-subset.t
t/05-covers.t
t/06-axt2fas.t
t/07-maf2fas.t
t/08-separate.t
t/09-links.t
t/10-replace.t
t/11-refine-msa.t
t/11-refine.t
t/12-split.t
t/13-slice.t
t/14-join.t
t/15-xlsx.t
t/16-check.t
t/17-concat.t
t/90-common-variations.t
t/90-common.t
t/91-common-trim.t
t/92-common-transform.t
t/93-common-ld.t
t/Arabid_thaliana.pair.fas
t/NC_000932.fa
t/NC_000932.fa.fai
t/RM11_1a.chr.sizes
t/S288cvsRM11_1a.slice.fas
t/S288cvsSpar.slice.fas
t/S288cvsYJM789.slice.fas
t/example.axt
t/example.fa
t/example.fas
t/example.maf
t/example.name.list
t/refine.fas
t/refine2.fas
t/replace.fail.tsv
t/replace.remove.tsv
t/replace.tsv
t/slice.fas
t/slice.yml
META.yml
MANIFEST