Advanced processing
------------------------------

.. _section2:

This section will guide you through advanced processing of files in RAW. It includes:
pair-distance distribution analysis using GNOM and BIFT methods, ambiguity assessment
for shape reconstructions, 3D reconstructions with bead models and electron density,
aligning 3D reconstructions with PDB files, SEC-SAXS data deconvolution using
singular value decomposition (SVD) and evolving factor analysis (EFA), baseline
corrections for SEC-SAXS data, and regularized alternating least squares (REGALS)
of SEC-SAXS and other SAXS data. It refers to the :ref:`RAW tutorial data <tutorialdata>`.

Select a section below to view the tutorial, or use the next and back buttons at
the bottom of the page to navigate through it in order.


.. toctree::
   :maxdepth: 2

   s2_gnom
   s2_bift
   s2_ambimeter
   s2_dammif
   s2_denss
   s2_align
   s2_svd
   s2_efa
   s2_regals
   s2_baseline
