getsize
Usage: getsize <datafile> [options]
Description:
getsize prints statistics about the sequences in
<datafile>.
Input:
- A file in FASTA format. If the filename is given as "-", then the program reads from standard input.
Output:
- Writes statistics about the sequences to
stdout.
Options:
-codons- Print frame 0 codon usage.-dna- Print DNA frequencies in background file format.-f- Print letter frequences.-ft- Print letter frequences in a LaTex table.-l- Just print the length of each sequence.-f- Do not print warnings about duplicate sequences.-prot- Print protein frequencies in background file format.-x- Translate DNA in 6 frames.
Bugs: None known.
Author: Tim Bailey