Package Index

Packages in the standard library

acepack	ace() and avas() for selecting regression transformations
annotate	Annotation for microarrays
AnnotationDbi	Annotation Database Interface
base	The R Base Package
base64enc	Tools for base64 encoding
BatchJobs	Batch computing with R.
BBmisc	Miscellaneous helper functions for B. Bischl.
Biobase	Biobase: Base functions for Bioconductor
BiocGenerics	S4 generic functions for Bioconductor
BiocInstaller	Install/Update Bioconductor and CRAN Packages
BiocParallel	Bioconductor facilities for parallel evaluation
bitops	Bitwise Operations
boot	Bootstrap Functions (originally by Angelo Canty for S)
brew	Templating Framework for Report Generation
caTools	Tools: moving window statistics, GIF, Base64, ROC AUC, etc.
checkmate	Fast and Versatile Argument Checks
class	Functions for Classification
cluster	Cluster Analysis Extended Rousseeuw et al.
codetools	Code Analysis Tools for R
colorspace	Color Space Manipulation
compiler	The R Compiler Package
datasets	The R Datasets Package
DBI	R Database Interface
DESeq2	Differential gene expression analysis based on the negative binomial distribution
dichromat	Color Schemes for Dichromats
digest	Create Cryptographic Hash Digests of R Objects
fail	File Abstraction Interface Layer (FAIL) mimicking a key-value store
foreach	Foreach looping construct for R
foreign	Read Data Stored by Minitab, S, SAS, SPSS, Stata, Systat, Weka, dBase, ...
Formula	Extended Model Formulas
gdata	Various R programming tools for data manipulation
genefilter	genefilter: methods for filtering genes from high-throughput experiments
geneplotter	Graphics related functions for Bioconductor
GenomeInfoDb	Utilities for manipulating chromosome and other 'seqname' identifiers
GenomicRanges	Representation and manipulation of genomic intervals
ggplot2	An implementation of the Grammar of Graphics
gplots	Various R Programming Tools for Plotting Data
graphics	The R Graphics Package
grDevices	The R Graphics Devices and Support for Colours and Fonts
grid	The Grid Graphics Package
gtable	Arrange grobs in tables.
gtools	Various R programming tools
Hmisc	Harrell Miscellaneous
IRanges	Infrastructure for manipulating intervals on sequences
iterators	Iterator construct for R
KernSmooth	Functions for kernel smoothing for Wand & Jones (1995)
labeling	Axis Labeling
lattice	Lattice Graphics
latticeExtra	Extra Graphical Utilities Based on Lattice
locfit	Local Regression, Likelihood and Density Estimation.
MASS	Support Functions and Datasets for Venables and Ripley's MASS
Matrix	Sparse and Dense Matrix Classes and Methods
methods	Formal Methods and Classes
mgcv	Mixed GAM Computation Vehicle with GCV/AIC/REML smoothness estimation
munsell	Munsell colour system
nlme	Linear and Nonlinear Mixed Effects Models
nnet	Feed-forward Neural Networks and Multinomial Log-Linear Models
parallel	Support for Parallel computation in R
plyr	Tools for splitting, applying and combining data
proto	Prototype object-based programming
RColorBrewer	ColorBrewer Palettes
Rcpp	Seamless R and C++ Integration
RcppArmadillo	Rcpp Integration for the Armadillo Templated Linear Algebra Library
reshape2	Flexibly Reshape Data: A Reboot of the Reshape Package.
rpart	Recursive Partitioning and Regression Trees
RSQLite	SQLite Interface for R
S4Vectors	S4 implementation of vectors and lists
scales	Scale functions for graphics.
sendmailR	send email using R
spatial	Functions for Kriging and Point Pattern Analysis
splines	Regression Spline Functions and Classes
stats	The R Stats Package
stats4	Statistical Functions using S4 Classes
stringr	Make it easier to work with strings.
survival	Survival Analysis
tcltk	Tcl/Tk Interface
tools	Tools for Package Development
utils	The R Utils Package
XML	Tools for parsing and generating XML within R and S-Plus.
xtable	Export tables to LaTeX or HTML
XVector	Representation and manpulation of external sequences