| ComBat | Adjust for batch effects using empirical Bayes framework. |
| f.pvalue | Quickly calculate F-test p-values |
| fsva | Single sample surrogate variable correction for prediciton problems. |
| irwsva.build | Build surrogate variables with an iterative algorithm from gene expression and model data |
| num.sv | Estimate number of surrogate variables to include in analysis |
| sva | Estimate surrogate variables with an iterative algorithm from gene expression and model data |
| twostepsva.build | Build surrogate variables from gene expression and model data |