<?xml version="1.0" encoding="utf-8"?>
<commandLine>
  <option name="export" short="e" version="3.0">
    <description arg="file">make an image from the fileToRender argument. The format is specified through the extension of the argument or by the -o fileFormatId=id option (get the id of available file formats with -o list).</description>
  </option>
  <option name="resources" short="r" version="3.4">
    <description arg="file">load the given resources file on startup instead of looking for a valid resources file in the standard locations.</description>
  </option>
  <option name="help" short="h" version="3.0">
    <description>show this little help.</description>
  </option>
  <option name="geometry" short="g" version="3.0">
    <description arg="&lt;w&gt;x&lt;h&gt;" default="600x600">specify the size of the rendering window, the size argument must have the following format: &lt;width&gt;x&lt;height&gt; with positive non null values.</description>
  </option>
  <option name="spin-file" short="s" version="3.1">
    <description arg="file">use the given argument as a spin indicator. If this option is used, V_Sim switches automatically to spin rendering whatever method is specified in the parameter file.</description>
  </option>
  <option name="hiding-mode" short="m" version="3.2">
    <description arg="id" default="0">policy used to show or not null modulus spins possible values are positives.</description>
  </option>
  <option name="spin-and-atomic" short="a" version="3.3">
    <description>always draws atomic rendering on node position in addition to spin rendering.</description>
  </option>
  <option name="colorize" short="c" version="3.1">
    <description arg="{file,property#propName}">the argument fileToRender must be called, then the given file of the option is used to colorize the elements. If argument is starting with &apos;property#&apos;, colorization data are taken from node property propName.</description>
  </option>
  <option name="use-column" short="u" version="3.1">
    <description arg="l:m:n">it specifies the columns to use from the data file for the three colour channels [l;m;n]. Columns are counted from 1. Use -3, -2, -1 and 0 to use the special values, constant 1, coord. x, coord. y, and coord. z, respectively.</description>
  </option>
  <option name="color-preset" short="d" version="3.1">
    <description arg="id">this option can be used with the &apos;--colorize&apos; one or the &apos;--build-map&apos; one. It chooses a preset color scheme. The id argument is an integer that corresponds to a defined color shade (ranging from 0).</description>
  </option>
  <option name="translate" short="t" version="3.3">
    <description arg="x:y:z">a file must be loaded. It applies the given translations to the loaded file. The units are those of the file. This is available for periodic file formats only.</description>
  </option>
  <option name="box-translate" short="q" version="3.8">
    <description arg="a:b:c">a file must be loaded. It applies the given translations to the loaded file. The translation is applied along box axis, normalised to 1. This is available for periodic file formats only.</description>
  </option>
  <option name="expand" short="x" version="3.4">
    <description arg="x:y:z">a file must be loaded. It applies the given expansion to the loaded file. The values are given in box coordinates. This is available for periodic file formats only.</description>
  </option>
  <option name="planes" short="p" version="3.2">
    <description arg="file">the argument fileToRender must be called, then the given file of the option is parsed as a list of planes and they are rendered.</description>
  </option>
  <option name="scalar-field" short="f" version="3.3">
    <description arg="{file,.}">the argument fileToRender must be called, then the given file of the option is parsed as a scalar field and loaded. Use &apos;.&apos; as a special value to reuse the main filename.</description>
  </option>
  <option name="iso-values" short="v" version="3.3">
    <description arg="v[:v]">must be used with the &apos;--scalar-field&apos; option, then the given surfaces are built and rendered. If a name is appended to a value using &apos;#&apos; as a separator, this name is used as the name for the iso-surface (i.e. 0.25#Blue). Use specific value &apos;auto&apos; to compute isosurfaces at half max and min value.</description>
  </option>
  <option name="iso-surfaces" short="i" version="3.2">
    <description arg="file">the argument fileToRender must be given, then the given file of the option is parsed and surfaces are rendered.</description>
  </option>
  <option name="build-map" short="b" version="3.4">
    <description arg="id[:id]">the argument fileToRender must be given, as the &apos;--planes&apos;, &apos;--color-preset&apos; and &apos;--scalar-field&apos; options used, then the given plane &apos;id&apos; is replaced by a coloured map using given scalar field and shade. &apos;id&apos; ranges from 0. If several ids are given, several maps are built.</description>
  </option>
  <option name="log-scale" version="3.4">
    <description arg="id">select the scaling method to use with gradients (0: linear, 1: log scaled and 2 is zero-centred log scale), default is linear scale.</description>
  </option>
  <option name="n-iso-lines" short="n" version="3.4">
    <description arg="val">when positive, val isolines are plotted on the coloured map.</description>
  </option>
  <option name="color-iso-lines" version="3.5">
    <description arg="[R:G:B] or auto" default="[0:0:0]">when given, generated iso-lines are colourised [R:G:B] or auto with the values. The specific value &apos;auto&apos; will produced iso-lines in inversed colours.</description>
  </option>
  <option name="fit-to-box" version="3.3">
    <description arg="val" default="TRUE">if val is not TRUE, the surfaces use their own bounding box.</description>
  </option>
  <option name="bg-image" version="3.4">
    <description arg="file">draw the given image on the background.</description>
  </option>
  <option name="option" short="o" version="3.3">
    <description arg="id=value">this is a generic way to give extended option. to V_Sim. As much as -o can be used. Each one store a key and its value (boolean, integer or float).</description>
  </option>
  <option name="window-mode" short="w" version="3.5">
    <description arg="mode" default="classic">used to choose the windowing mode. By default the command panel and the rendering window are separated. In the &apos;oneWindow&apos; mode they are joined. In the &apos;renderOnly&apos; mode, the command panel is not used.</description>
  </option>
  <option name="i-set" version="3.5">
    <description arg="i" default="0">this flag is used to choose the id of the loaded file if the format has support for multiple ids in one file (see XYZ format or -posi.d3 ones).</description>
  </option>
  <option name="value-file" version="3.5">
    <description arg="file">specify an XML file with some value information for V_Sim, like a list of planes, highlighted nodes... It replaces and extend the previous --planes option.</description>
  </option>
  <option name="map-precision" version="3.5">
    <description arg="prec" default="100">Give the precision in percent to render the coloured map.</description>
  </option>
  <option name="map-clamp" version="3.6">
    <description arg="min:max or auto" default="auto">Set the minimum and maximum values for the coloured map rendering.</description>
  </option>
  <option name="color-clamp" version="3.7">
    <description arg="col#min:max or auto" default="auto">Range to adjust values into for colourisation. col specifiesthe column to apply the range to. Use -2, -1 and 0 for x, yand z directions respectively.</description>
  </option>
  <option name="scaling-column" version="3.7">
    <description arg="id">used with a data file (see -c), it specifies the column id to be used to scale the nodes.</description>
  </option>
  <option name="diff-from" version="3.8">
    <description arg="file">Compute the geometric difference between load file and this argument.</description>
  </option>
  <option name="phonon-mode" version="3.8">
    <description arg="mode" default="0">Load the given phonon mode.</description>
  </option>
  <option name="time-offset" version="3.8">
    <description arg="offset" default="0">Displace nodes according to phonons at the given reduced time in [0;1].</description>
  </option>
  <option name="phonon-amplitude" version="3.8">
    <description arg="ampl" default="1.">Maximum displacement for phonons.</description>
  </option>
</commandLine>
