# IGBLASTN 2.2.29+
# Query: M00559:137:000000000-ARGK3:1:1102:21678:7874;size=83;
# Database: iteration-01/database/human_V iteration-01/database/human_D iteration-01/database/human_J
# Domain classification requested: imgt

# V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches having the same score and percent identity, if present, are separated by a comma.
IGHV6-1*01	IGHD4-23*01	IGHJ6*02	VH	No	N/A	N/A	+

# V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	G	CGGTGGTAAC	A	ACTAC	

# Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	25	99	75	75	0	0	100
CDR1-IMGT	100	129	30	30	0	0	100
FR2-IMGT	130	180	51	51	0	0	100
CDR2-IMGT	181	207	27	27	0	0	100
FR3-IMGT	208	321	114	114	0	0	100
CDR3-IMGT (germline)	322	328	7	7	0	0	100
Total	N/A	N/A	304	304	0	0	100

# Hit table (the first field indicates the chain type of the hit)
# Fields: subject id, q. start, query seq, s. start, subject seq, % identity, subject length, evalue
# 3 hits found
V	IGHV6-1*01	25	CAGGTACAGCTGCAGCAGTCAGGTCCAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCAAGAG	1	CAGGTACAGCTGCAGCAGTCAGGTCCAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCAAGAG	100.00	305	3e-136
D	IGHD4-23*01	330	CGGTGGTAAC	7	CGGTGGTAAC	100.00	19	0.22
J	IGHJ6*02	341	ACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA	13	ACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA	100.00	62	3e-25
