prune.hpp File Reference

#include <vg/vg.pb.h>
#include "handle.hpp"
#include "hash_map.hpp"
#include "position.hpp"

Classes
struct	vg::walk_t
	Record a <=k-length walk in the context of a graph. More...

Namespaces
	vg

Functions
pair_hash_set< edge_t >	vg::find_edges_to_prune (const HandleGraph &graph, size_t k, size_t edge_max)
	Iterate over all the walks up to length k, adding edges which. More...

Detailed Description

Functions for working with kmers_t's in HandleGraphs.