H_gamma_2_3 = Atom('h')
H_beta = Atom('h')
O_gamma_1 = Atom('o')
H_gamma_1 = Atom('h')
C_gamma_2 = Atom('c')
C_beta = Atom('c')
H_gamma_2_1 = Atom('h')
H_gamma_2_2 = Atom('h')
bonds = [Bond(H_beta, C_beta), Bond(C_gamma_2, C_beta), Bond(H_gamma_2_1, C_gamma_2), Bond(H_gamma_2_2, C_gamma_2), Bond(H_gamma_2_3, C_gamma_2), Bond(O_gamma_1, C_beta), Bond(H_gamma_1, O_gamma_1), ]
pdbmap = [('THR', {'OG1': O_gamma_1, 'HB': H_beta, 'CG2': C_gamma_2, '3HG2': H_gamma_2_3, 'CB': C_beta, '1HG': H_gamma_1, '1HG2': H_gamma_2_1, '2HG2': H_gamma_2_2, }, ), ]
amber_atom_type = {O_gamma_1: 'OH', C_gamma_2: 'CT', H_gamma_2_1: 'HC', H_gamma_2_2: 'HC', H_gamma_1: 'HO', C_beta: 'CT', H_beta: 'H1', H_gamma_2_3: 'HC', }
amber12_atom_type = {O_gamma_1: 'OH', C_gamma_2: 'CT', H_gamma_2_1: 'HC', H_gamma_2_2: 'HC', H_gamma_1: 'HO', C_beta: '3C', H_beta: 'H1', H_gamma_2_3: 'HC', }
pdb_alternative = {'HG1': '1HG', 'HG22': '2HG2', 'HG23': '3HG2', 'HG21': '1HG2', }
name = 'thr_sidechain'
