"""A setuptools based setup module.

See:
https://packaging.python.org/en/latest/distributing.html
https://github.com/pypa/sampleproject
"""

import re
# To use a consistent encoding
from codecs import open
from os import path

# Always prefer setuptools over distutils
from setuptools import (
    find_packages,
    setup
)

here = path.abspath(path.dirname(__file__))

# Get the long description from the README file
with open(path.join(here, 'README.md'), encoding='utf-8') as f:
    long_description = f.read()


def read(*parts):
    with open(path.join(here, *parts)) as fp:
        return fp.read()


def find_version(*file_paths):
    version_file = read(*file_paths)
    version_match = re.search(r"^__version__ = ['\"]([^'\"]*)['\"]",
                              version_file, re.M)
    if version_match:
        return version_match.group(1)
    raise RuntimeError("Unable to find version string.")


# Arguments marked as "Required" below must be included for upload to PyPI.
# Fields marked as "Optional" may be commented out.

setup(
    # This is the name of your project. The first time you publish this
    # package, this name will be registered for you. It will determine how
    # users can install this project, e.g.:
    #
    # $ pip install sampleproject
    #
    # And where it will live on PyPI: https://pypi.org/project/sampleproject/
    name='ctdconverter',  # Required

    # Versions should comply with PEP 440:
    # https://www.python.org/dev/peps/pep-0440/
    #
    # For a discussion on single-sourcing the version across setup.py and the
    # project code, see
    # https://packaging.python.org/en/latest/single_source_version.html
    version=find_version("ctdconverter/__init__.py"),  # Required

    # This is a one-line description or tagline of what your project does. This
    # corresponds to the "Summary" metadata field:
    # https://packaging.python.org/specifications/core-metadata/#summary
    description='Convert CTD files into Galaxy tool and CWL CommandLineTool files',  # Required

    # This is an optional longer description of your project that represents
    # the body of text which users will see when they visit PyPI.
    #
    # Often, this is the same as your README, so you can just read it in from
    # that file directly (as we have already done above)
    #
    # This field corresponds to the "Description" metadata field:
    # https://packaging.python.org/specifications/core-metadata/#description-optional
    long_description=long_description,  # Optional

    # This should be a valid link to your project's main homepage.
    #
    # This field corresponds to the "Home-Page" metadata field:
    # https://packaging.python.org/specifications/core-metadata/#home-page-optional
    url='https://github.com/WorkflowConversion/CTDConverter',  # Optional

    # This should be your name or the name of the organization which owns the
    # project.
    author='The WorkflowConversion team',  # Optional

    # This should be a valid email address corresponding to the author listed
    # above.
    # author_email='authors@example.com',  # Optional

    # Classifiers help users find your project by categorizing it.
    #
    # For a list of valid classifiers, see
    # https://pypi.python.org/pypi?%3Aaction=list_classifiers
    classifiers=[  # Optional
        # How mature is this project? Common values are
        #   3 - Alpha
        #   4 - Beta
        #   5 - Production/Stable
        'Development Status :: 3 - Alpha',
        'Intended Audience :: Developers',
        'Topic :: Software Development :: Build Tools',
        'License :: OSI Approved :: GNU General Public License v3 (GPLv3)',
        'License :: OSI Approved :: Apache Software License',
        'Programming Language :: Python :: 3',
        'Programming Language :: Python :: 3.6',
        'Programming Language :: Python :: 3.7',
        'Programming Language :: Python :: 3.8',
        'Programming Language :: Python :: 3.9',
    ],

    # This field adds keywords for your project which will appear on the
    # project page. What does your project relate to?
    #
    # Note that this is a string of words separated by whitespace, not a list.
    keywords='CTD CWL CommonWL Galaxy Workflows WorkflowConversion',  # Optional

    packages=find_packages(exclude=['contrib', 'docs', 'tests']),  # Required

    # This field lists other packages that your project depends on to run.
    # Any package you put here will be installed by pip when your project is
    # installed, so they must be valid existing projects.
    #
    # For an analysis of "install_requires" vs pip's requirements files see:
    # https://packaging.python.org/en/latest/requirements.html
    install_requires=['lxml', 'ruamel.yaml', 'ctdopts'],  # Optional

    # List additional groups of dependencies here (e.g. development
    # dependencies). Users will be able to install these using the "extras"
    # syntax, for example:
    #
    #   $ pip install sampleproject[dev]
    #
    # Similar to `install_requires` above, these must be valid existing
    # projects.
    # extras_require={  # Optional
    #     'dev': ['check-manifest'],
    #     'test': ['coverage'],
    # },

    # If there are data files included in your packages that need to be
    # installed, specify them here.
    package_data={  # Optional
        'ctdconverter': ['ctdconverter/galaxy/macros.xml'],
    },

    # To provide executable scripts, use entry points in preference to the
    # "scripts" keyword. Entry points provide cross-platform support and allow
    # `pip` to create the appropriate form of executable for the target
    # platform.
    #
    # For example, the following would provide a command called `sample` which
    # executes the function `main` from this package when invoked:
    entry_points={  # Optional
        'console_scripts': [
            'CTDConverter=ctdconverter.convert:main',
        ],
    },
    python_requires="~=3.6",  # greater than or equal to 3.6, but not yet 4.x
)
