Build.PL
CHANGES
lib/Bio/ToolBox.pm
lib/Bio/ToolBox/big_helper.pm
lib/Bio/ToolBox/Data.pm
lib/Bio/ToolBox/data_helper.pm
lib/Bio/ToolBox/db_helper.pm
lib/Bio/ToolBox/db_helper/bam.pm
lib/Bio/ToolBox/db_helper/bigbed.pm
lib/Bio/ToolBox/db_helper/bigwig.pm
lib/Bio/ToolBox/db_helper/config.pm
lib/Bio/ToolBox/db_helper/gff3_parser.pm
lib/Bio/ToolBox/db_helper/useq.pm
lib/Bio/ToolBox/db_helper/wiggle.pm
lib/Bio/ToolBox/file_helper.pm
MANIFEST			This list of files
META.json
META.yml
README
scripts/average_gene.pl
scripts/bam2gff_bed.pl
scripts/bam2wig.pl
scripts/bar2wig.pl
scripts/big_file2gff3.pl
scripts/bin_genomic_data.pl
scripts/change_chr_prefix.pl
scripts/change_cluster_order.pl
scripts/compare_subfeature_scores.pl
scripts/convert_yeast_genome_version.pl
scripts/correlate_position_data.pl
scripts/CpG_calculator.pl
scripts/data2bed.pl
scripts/data2fasta.pl
scripts/data2frequency.pl
scripts/data2gff.pl
scripts/data2wig.pl
scripts/db_setup.pl
scripts/db_types.pl
scripts/filter_bam.pl
scripts/find_enriched_regions.pl
scripts/get_actual_nuc_sizes.pl
scripts/get_bam_seq_stats.pl
scripts/get_datasets.pl
scripts/get_ensembl_annotation.pl
scripts/get_feature_info.pl
scripts/get_features.pl
scripts/get_gene_regions.pl
scripts/get_intersecting_features.pl
scripts/get_relative_data.pl
scripts/gff3_to_ucsc_table.pl
scripts/graph_data.pl
scripts/graph_histogram.pl
scripts/graph_profile.pl
scripts/intersect_nucs.pl
scripts/intersect_SNPs.pl
scripts/join_data_file.pl
scripts/locate_SNPs.pl
scripts/manipulate_datasets.pl
scripts/map_nucleosomes.pl
scripts/map_oligo_data2gff.pl
scripts/map_transcripts.pl
scripts/merge_datasets.pl
scripts/novo_wrapper.pl
scripts/process_microarray.pl
scripts/pull_features.pl
scripts/run_cluster.pl
scripts/split_bam_by_isize.pl
scripts/split_data_file.pl
scripts/ucsc_cytoband2gff3.pl
scripts/ucsc_table2gff3.pl
scripts/verify_nucleosome_mapping.pl
scripts/wig2data.pl
t/01.Data.t
t/02.DB.t
t/03.Bam.t
t/04.BigBed.t
t/05.BigWig.t
t/06.BigWigSet.t
t/07.USeq.t
t/08.Wiggle.t
t/Data/biotoolbox.cfg
t/Data/chrI.gff3.gz
t/Data/sample.bed
t/Data/sample1.bam
t/Data/sample1.bam.bai
t/Data/sample1.bb
t/Data/sample2.bw
t/Data/sample2.wib
t/Data/sample3/metadata.txt
t/Data/sample3/sample3_f.bw
t/Data/sample3/sample3_r.bw
t/Data/sample3.useq
