!read lang/help.phtml.$modu_lang $special_parm

!exit
Conversion options
-f <#> Start import at molecule # specified
-l <#> End import at molecule # specified
-e Continue with next object after error, if possible
-z Compress the output with gzip
-k Attempt to translate keywords
-H Outputs this help text
-Hxxx (xxx is file format ID e.g. -Hcml) gives format info
-Hall Outputs details of all formats
-V Outputs version number
-L <category> Lists plugin classes of this category, e.g. <formats>
   Use just -L for a list of plugin categories.
   Use -L <ID> e.g. -L sdf for details of a format or other plugin.
-m Produces multiple output files, to allow:
    Splitting: e.g.        obabel infile.mol -O new.smi -m
      puts each molecule into new1.smi new2.smi etc
    Batch conversion: e.g. obabel *.mol -osmi -m
      converts each input file to a .smi file
For conversions of molecules
Additional options :
-d Delete hydrogens (make implicit)
-h Add hydrogens (make explicit)
-p <pH> Add hydrogens appropriate for this pH
-b Convert dative bonds e.g.[N+]([O-])=O to N(=O)=O
-r Remove all but the largest contiguous fragment
-c Center Coordinates
-C Combine mols in first file with others having same name
--filter <filterstring> Filter: convert only when tests are true:
--add <list> Add properties from descriptors
--delete <list> Delete properties in list
--append <list> Append properties or descriptors in list to title:
-s"smarts" Convert only if match SMARTS or mols in file:
-v"smarts" Convert only if NO match to SMARTS or mols in file(not displayed in GUI)
--join Join all input molecules into a single output molecule
--separate Output disconnected fragments separately
--property <attrib> <value> add or replace a property (SDF)
--title <title> Add or replace molecule title
--addtotitle <text> Append text to title
--writeconformers Output multiple conformers separately
--addoutindex Append output index to title
--0xout <file.xxx> Additional file output
--AddInIndex Append input index to title
--AddPolarH Adds hydrogen to polar atoms only
--canonical Canonicalize the atom order
--fillUC <param> Fill the unit cell (strict or keepconnect)
--gen2D Generate 2D coordinates
--gen3D Generate 3D coordinates
--partialcharge <method> Calculate partial charges by specified method
--readconformer Adjacent conformers combined into a single molecule
--sort <desc> Sort by descriptor(~desc for reverse)
--unique [param] remove duplicates by descriptor;default inchi
