
#include "scrup_vcf.h"


//void scrup_svs(std::string svs_vcf, string snp_vcf, std::string output){

	//parse SVs in tree structure.


	//run over SNP and intersect with SVs
	// hom del + SNP -> delete del
	// het del + het SNP -> flag del
	//


	//output vcf file.

//}
