# macsyfinder 20211014.dev
# models : functional-0.0b2
# /home/bneron/Projects/GEM/MacSyFinder/MacSyFinder/py37/bin/macsyfinder --db-type ordered_replicon --models-dir tests/data/models/ -m functional A B --relative-path --sequence-db tests/data/base/test_9.fasta
# Systems found:

system id = UserReplicon_A_1
model = functional/A
replicon = UserReplicon
clusters = [('VICH001.B.00001.C001_01397', 'T1SS_abc', 9), ('VICH001.B.00001.C001_01398', 'T1SS_mfp', 10), ('VICH001.B.00001.C001_01400', 'T2SS_gspD', 13)]
occ = 1
wholeness = 1.000
loci nb = 1
score = 2.000

mandatory genes:
	- T2SS_gspD: 1 (T2SS_gspD [UserReplicon_B_2])

accessory genes:
	- T1SS_abc: 1 (T1SS_abc)
	- T1SS_mfp: 1 (T1SS_mfp)

neutral genes:

============================================================
system id = UserReplicon_B_2
model = functional/B
replicon = UserReplicon
clusters = [('VICH001.B.00001.C001_01400', 'T2SS_gspD', 13), ('VICH001.B.00001.C001_01506', 'T1SS_omf', 15), ('VICH001.B.00001.C001_02599', 'T2SS_gspF', 17)]
occ = 1
wholeness = 1.000
loci nb = 1
score = 2.000

mandatory genes:
	- T2SS_gspD: 1 (T2SS_gspD [UserReplicon_A_1])

accessory genes:
	- T1SS_omf: 1 (T1SS_omf)
	- T2SS_gspF: 1 (T2SS_gspF)

neutral genes:

============================================================
