# macsyfinder 20211008.dev
# models : functional-0.0b2
# /home/bneron/Projects/GEM/MacSyFinder/MacSyFinder/py37/bin/macsyfinder --db-type ordered_replicon --replicon-topology circular --models-dir tests/data/models/ -m functional T12SS-simple-exch --relative-path --sequence-db tests/data/base/test_3.fasta -o functional_test_ordered_circular
# Systems found:

system id = UserReplicon_T12SS-simple-exch_1
model = functional/T12SS-simple-exch
replicon = UserReplicon
clusters = [('VICH001.B.00001.C001_01397', 'T1SS_abc', 2), ('VICH001.B.00001.C001_01398', 'T1SS_mfp', 3), ('VICH001.B.00001.C001_01399', 'T1SS_abc', 37), ('VICH001.B.00001.C001_01400', 'T2SS_gspD', 38)]
occ = 2
wholeness = 1.000
loci nb = 1
score = 2.300

mandatory genes:
	- T1SS_abc: 2 (T1SS_abc, T1SS_abc)
	- T1SS_omf: 1 (T2SS_gspD)

accessory genes:
	- T1SS_mfp: 1 (T1SS_mfp)

neutral genes:

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