GT-STAT(1)

NAME
gt-stat - Show statistics about features contained in GFF3 files.

SYNOPSIS

gt stat [option ...] [GFF3_file ...]

OPTIONS

-genelengthdistri
    show gene length distribution (default: no)

-genescoredistri
    show gene score distribution (default: no)

-exonlengthdistri
    show exon length distribution (default: no)

-exonnumberdistri
    show exon number distribution (default: no)

-intronlengthdistri
    show intron length distribution (default: no)

-cdslengthdistri
    show CDS length distribution (measured in amino acids) (default: no)

-source
    show the set of used source tags (column 2 in regular GFF3 lines) (default: no)

-addintrons
    add intron features between existing exon features (before computing stats) (default: no)

-v
    be verbose (default: no)

-o
    redirect output to specified file (default: undefined)

-gzip
    write gzip compressed output file (default: no)

-bzip2
    write bzip2 compressed output file (default: no)

-force
    force writing to output file (default: no)

-help
    display help and exit

-version
    display version information and exit

AUTHOR

Report bugs to <gt-users@genometools.org>.