GT-ENCSEQ-DECODE(1)

NAME
gt-encseq-decode - Decode/extract encoded sequences.

SYNOPSIS

gt encseq decode (sequence_file|indexname)

OPTIONS

-mirrored
    virtually append the reverse complement of each sequence (default: no)

-lossless
    allow lossless original sequence retrieval (default: no)

-dir
    specify reading direction (fwd, cpl, rev, rcl) (default: fwd)

-seq
    extract sequence identified by its number (default: undefined)

-seqrange
    extract multiple consecutive sequences (default: undefined)

-output
    specify output format (choose from fasta|concat) (default: fasta)

-range
    concatenated range to extract (implies -output concat) (default: undefined)

-sepchar
    specify character to print as SEPARATOR (default: |)

-help
    display help for basic options and exit

-help+
    display help for all options and exit

-version
    display version information and exit

AUTHOR

Report bugs to <gt-users@genometools.org>.