GT-CONVERTSEQ(1)

NAME
gt-convertseq - Parse and convert sequence file formats.

SYNOPSIS

gt convertseq [options] file [...]

OPTIONS

-v
    be verbose (default: no)

-r
    reverse complement sequences (default: no)

-showfilelengthvalues
    show filelengths (default: no)

-noseq
    do not show sequences (default: no)

-fastawidth
    FASTA output line width (default: 60)

-contractdnawc
    replace stretches of DNA wildcards with a single N (default: no)

-contractproteinwc
    replace stretches of protein wildcards with a single X (default: no)

-o
    redirect output to specified file (default: undefined)

-gzip
    write gzip compressed output file (default: no)

-bzip2
    write bzip2 compressed output file (default: no)

-force
    force writing to output file (default: no)

-help
    display help and exit

-version
    display version information and exit

AUTHOR

Report bugs to <gt-users@genometools.org>.